Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Gm14726-201ENSMUST00000120623 896 ntBASIC12.2□□□□□ -0.46
Nkx2-6P43688 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Gm13316-201ENSMUST00000140537 691 ntBASIC12.2□□□□□ -0.46
Nkx2-6P43688 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nkx2-6P43688 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.2□□□□□ -0.46
Nkx2-6P43688 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nkx2-6P43688 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.2□□□□□ -0.46
Nkx2-6P43688 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.2□□□□□ -0.46
Nkx2-6P43688 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nkx2-6P43688 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.19□□□□□ -0.46
Nkx2-6P43688 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.19□□□□□ -0.46
Nkx2-6P43688 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-6P43688 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Gm8738-201ENSMUST00000172606 329 ntBASIC12.19□□□□□ -0.46
Nkx2-6P43688 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Nkx2-6P43688 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Nkx2-6P43688 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms