Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Hist1h1aP43275 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Hist1h1aP43275 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.66□□□□□ -0.7
Hist1h1aP43275 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.66□□□□□ -0.7
Hist1h1aP43275 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1aP43275 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC10.66□□□□□ -0.7
Hist1h1aP43275 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.66□□□□□ -0.7
Hist1h1aP43275 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Gm19931-201ENSMUST00000198920 368 ntBASIC10.66□□□□□ -0.7
Hist1h1aP43275 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.66□□□□□ -0.7
Hist1h1aP43275 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Hist1h1aP43275 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Hist1h1aP43275 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hist1h1aP43275 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Mir6956-201ENSMUST00000183598 62 ntBASIC10.65□□□□□ -0.7
Hist1h1aP43275 Gm27306-201ENSMUST00000183970 107 ntBASIC10.65□□□□□ -0.7
Hist1h1aP43275 Gm27989-201ENSMUST00000184721 107 ntBASIC10.65□□□□□ -0.7
Hist1h1aP43275 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Gm43094-201ENSMUST00000196549 921 ntBASIC10.65□□□□□ -0.7
Hist1h1aP43275 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hist1h1aP43275 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.65□□□□□ -0.7
Hist1h1aP43275 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hist1h1aP43275 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC10.65□□□□□ -0.7
Hist1h1aP43275 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Hist1h1aP43275 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.65□□□□□ -0.71
Hist1h1aP43275 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms