Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl28P41105 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Rpl28P41105 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl28P41105 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl28P41105 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl28P41105 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Rpl28P41105 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl28P41105 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Rpl28P41105 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl28P41105 Gm15920-201ENSMUST00000118998 402 ntBASIC8.68□□□□□ -1.02
Rpl28P41105 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC8.68□□□□□ -1.02
Rpl28P41105 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC8.68□□□□□ -1.02
Rpl28P41105 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC8.68□□□□□ -1.02
Rpl28P41105 Gm27321-201ENSMUST00000185021 205 ntBASIC8.68□□□□□ -1.02
Rpl28P41105 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC8.68□□□□□ -1.02
Rpl28P41105 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl28P41105 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC8.68□□□□□ -1.02
Rpl28P41105 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl28P41105 Gm45841-201ENSMUST00000207700 164 ntBASIC8.68□□□□□ -1.02
Rpl28P41105 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC8.68□□□□□ -1.02
Rpl28P41105 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC8.68□□□□□ -1.02
Rpl28P41105 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Rpl28P41105 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl28P41105 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl28P41105 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl28P41105 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
Rpl28P41105 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Rpl28P41105 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl28P41105 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Rpl28P41105 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl28P41105 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl28P41105 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC8.68□□□□□ -1.02
Rpl28P41105 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl28P41105 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl28P41105 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl28P41105 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl28P41105 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rpl28P41105 Gm44086-201ENSMUST00000203251 2349 ntBASIC8.68□□□□□ -1.02
Rpl28P41105 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC8.67□□□□□ -1.02
Rpl28P41105 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC8.67□□□□□ -1.02
Rpl28P41105 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC8.67□□□□□ -1.02
Rpl28P41105 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC8.67□□□□□ -1.02
Rpl28P41105 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Gm6912-201ENSMUST00000117218 544 ntBASIC8.67□□□□□ -1.02
Rpl28P41105 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC8.67□□□□□ -1.02
Rpl28P41105 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC8.67□□□□□ -1.02
Rpl28P41105 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Rpl28P41105 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Rpl28P41105 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
Rpl28P41105 Gm27772-201ENSMUST00000184900 187 ntBASIC8.67□□□□□ -1.02
Rpl28P41105 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC8.67□□□□□ -1.02
Rpl28P41105 Gm36970-201ENSMUST00000193688 1859 ntBASIC8.67□□□□□ -1.02
Rpl28P41105 Gm37014-201ENSMUST00000194723 2253 ntBASIC8.67□□□□□ -1.02
Rpl28P41105 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC8.67□□□□□ -1.02
Rpl28P41105 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC8.67□□□□□ -1.02
Rpl28P41105 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Rpl28P41105 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 AC131997.1-201ENSMUST00000228611 1229 ntBASIC8.67□□□□□ -1.02
Rpl28P41105 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Rpl28P41105 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Rpl28P41105 Mir497b-201ENSMUST00000093601 125 ntBASIC8.67□□□□□ -1.02
Rpl28P41105 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC8.67□□□□□ -1.02
Rpl28P41105 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rpl28P41105 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl28P41105 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl28P41105 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Rpl28P41105 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl28P41105 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC8.66□□□□□ -1.02
Rpl28P41105 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Rpl28P41105 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Rpl28P41105 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms