Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.6□□□□□ -0.71
Timp3P39876 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Timp3P39876 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.6□□□□□ -0.71
Timp3P39876 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Timp3P39876 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Timp3P39876 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.6□□□□□ -0.71
Timp3P39876 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.6□□□□□ -0.71
Timp3P39876 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.6□□□□□ -0.71
Timp3P39876 Gm6013-201ENSMUST00000212264 699 ntBASIC10.6□□□□□ -0.71
Timp3P39876 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Timp3P39876 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Timp3P39876 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Timp3P39876 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.59□□□□□ -0.71
Timp3P39876 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.59□□□□□ -0.71
Timp3P39876 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.59□□□□□ -0.71
Timp3P39876 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Timp3P39876 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Timp3P39876 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.59□□□□□ -0.71
Timp3P39876 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Timp3P39876 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.59□□□□□ -0.71
Timp3P39876 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
Timp3P39876 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC10.59□□□□□ -0.71
Timp3P39876 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Gm2231-201ENSMUST00000125661 612 ntBASIC10.59□□□□□ -0.71
Timp3P39876 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.59□□□□□ -0.71
Timp3P39876 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.59□□□□□ -0.71
Timp3P39876 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC10.59□□□□□ -0.71
Timp3P39876 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Gm27682-201ENSMUST00000183930 110 ntBASIC10.59□□□□□ -0.71
Timp3P39876 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.59□□□□□ -0.71
Timp3P39876 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.59□□□□□ -0.71
Timp3P39876 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Gm10268-201ENSMUST00000085340 555 ntBASIC10.59□□□□□ -0.71
Timp3P39876 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Timp3P39876 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.59□□□□□ -0.71
Timp3P39876 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.59□□□□□ -0.71
Timp3P39876 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.59□□□□□ -0.71
Timp3P39876 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Timp3P39876 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.59□□□□□ -0.71
Timp3P39876 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms