Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col18a1P39061 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col18a1P39061 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col18a1P39061 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC16.65■□□□□ 0.26
Col18a1P39061 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC16.65■□□□□ 0.26
Col18a1P39061 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col18a1P39061 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col18a1P39061 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col18a1P39061 Gm12943-201ENSMUST00000119616 210 ntBASIC16.64■□□□□ 0.25
Col18a1P39061 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col18a1P39061 Gm19587-201ENSMUST00000191395 545 ntBASIC16.64■□□□□ 0.25
Col18a1P39061 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col18a1P39061 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.64■□□□□ 0.25
Col18a1P39061 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col18a1P39061 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col18a1P39061 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col18a1P39061 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col18a1P39061 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Col18a1P39061 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Col18a1P39061 Gm8617-201ENSMUST00000118796 2222 ntBASIC16.64■□□□□ 0.25
Col18a1P39061 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col18a1P39061 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col18a1P39061 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col18a1P39061 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col18a1P39061 Gm25766-201ENSMUST00000104101 131 ntBASIC16.64■□□□□ 0.25
Col18a1P39061 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC16.64■□□□□ 0.25
Col18a1P39061 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC16.64■□□□□ 0.25
Col18a1P39061 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col18a1P39061 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col18a1P39061 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC16.64■□□□□ 0.25
Col18a1P39061 Gm18968-201ENSMUST00000221319 862 ntBASIC16.64■□□□□ 0.25
Col18a1P39061 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Col18a1P39061 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Col18a1P39061 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col18a1P39061 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Col18a1P39061 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC16.64■□□□□ 0.25
Col18a1P39061 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC16.64■□□□□ 0.25
Col18a1P39061 Gm5451-201ENSMUST00000080545 579 ntBASIC16.64■□□□□ 0.25
Col18a1P39061 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Col18a1P39061 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Col18a1P39061 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col18a1P39061 Gm43045-201ENSMUST00000198725 2095 ntBASIC16.64■□□□□ 0.25
Col18a1P39061 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col18a1P39061 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col18a1P39061 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col18a1P39061 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col18a1P39061 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col18a1P39061 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Col18a1P39061 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col18a1P39061 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col18a1P39061 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col18a1P39061 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Col18a1P39061 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC16.63■□□□□ 0.25
Col18a1P39061 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC16.63■□□□□ 0.25
Col18a1P39061 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col18a1P39061 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC16.63■□□□□ 0.25
Col18a1P39061 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col18a1P39061 Gm24398-201ENSMUST00000157870 109 ntBASIC16.63■□□□□ 0.25
Col18a1P39061 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC16.63■□□□□ 0.25
Col18a1P39061 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC16.63■□□□□ 0.25
Col18a1P39061 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Col18a1P39061 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
Col18a1P39061 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC16.63■□□□□ 0.25
Col18a1P39061 CT009536.2-201ENSMUST00000225370 665 ntBASIC16.63■□□□□ 0.25
Col18a1P39061 AC102368.1-201ENSMUST00000227161 892 ntBASIC16.63■□□□□ 0.25
Col18a1P39061 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Col18a1P39061 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col18a1P39061 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC16.63■□□□□ 0.25
Col18a1P39061 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Col18a1P39061 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col18a1P39061 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col18a1P39061 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col18a1P39061 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col18a1P39061 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col18a1P39061 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Col18a1P39061 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Col18a1P39061 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC16.62■□□□□ 0.25
Col18a1P39061 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col18a1P39061 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col18a1P39061 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col18a1P39061 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col18a1P39061 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col18a1P39061 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col18a1P39061 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col18a1P39061 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Col18a1P39061 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Col18a1P39061 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC16.62■□□□□ 0.25
Col18a1P39061 Gm38117-201ENSMUST00000194653 939 ntBASIC16.62■□□□□ 0.25
Col18a1P39061 Gm38151-201ENSMUST00000195085 289 ntBASIC16.62■□□□□ 0.25
Col18a1P39061 Gm42433-201ENSMUST00000196806 940 ntBASIC16.62■□□□□ 0.25
Col18a1P39061 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Col18a1P39061 Gm5805-201ENSMUST00000072779 456 ntBASIC16.62■□□□□ 0.25
Col18a1P39061 Gm16380-201ENSMUST00000077997 478 ntBASIC16.62■□□□□ 0.25
Col18a1P39061 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.62■□□□□ 0.25
Col18a1P39061 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col18a1P39061 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Col18a1P39061 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col18a1P39061 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC16.62■□□□□ 0.25
Col18a1P39061 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col18a1P39061 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms