Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.61□□□□□ -0.23
Rfc1P35601 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Rfc1P35601 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rfc1P35601 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rfc1P35601 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rfc1P35601 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfc1P35601 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.6□□□□□ -0.23
Rfc1P35601 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.6□□□□□ -0.23
Rfc1P35601 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.6□□□□□ -0.23
Rfc1P35601 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rfc1P35601 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.6□□□□□ -0.23
Rfc1P35601 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.6□□□□□ -0.23
Rfc1P35601 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.6□□□□□ -0.23
Rfc1P35601 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Rfc1P35601 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rfc1P35601 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.6□□□□□ -0.23
Rfc1P35601 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.6□□□□□ -0.23
Rfc1P35601 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.6□□□□□ -0.23
Rfc1P35601 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Rfc1P35601 Gm46209-201ENSMUST00000217912 553 ntBASIC13.6□□□□□ -0.23
Rfc1P35601 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rfc1P35601 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rfc1P35601 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Rfc1P35601 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.6□□□□□ -0.23
Rfc1P35601 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.6□□□□□ -0.23
Rfc1P35601 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.6□□□□□ -0.23
Rfc1P35601 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.6□□□□□ -0.23
Rfc1P35601 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
Rfc1P35601 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rfc1P35601 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfc1P35601 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfc1P35601 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfc1P35601 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfc1P35601 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfc1P35601 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rfc1P35601 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rfc1P35601 Gm13385-201ENSMUST00000121089 220 ntBASIC13.59□□□□□ -0.23
Rfc1P35601 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.59□□□□□ -0.23
Rfc1P35601 Gm38294-201ENSMUST00000192831 381 ntBASIC13.59□□□□□ -0.23
Rfc1P35601 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.59□□□□□ -0.23
Rfc1P35601 Gm9229-201ENSMUST00000222777 126 ntBASIC13.59□□□□□ -0.23
Rfc1P35601 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfc1P35601 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rfc1P35601 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rfc1P35601 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rfc1P35601 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfc1P35601 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rfc1P35601 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rfc1P35601 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.59□□□□□ -0.23
Rfc1P35601 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rfc1P35601 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rfc1P35601 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Rfc1P35601 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Rfc1P35601 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rfc1P35601 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.58□□□□□ -0.24
Rfc1P35601 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms