Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Mmp13P33435 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp13P33435 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp13P33435 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.21□□□□□ -0.29
Mmp13P33435 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp13P33435 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp13P33435 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.21□□□□□ -0.29
Mmp13P33435 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp13P33435 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Mmp13P33435 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.21□□□□□ -0.29
Mmp13P33435 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Mmp13P33435 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.21□□□□□ -0.29
Mmp13P33435 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Mmp13P33435 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.21□□□□□ -0.29
Mmp13P33435 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.21□□□□□ -0.29
Mmp13P33435 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp13P33435 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp13P33435 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp13P33435 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.21□□□□□ -0.29
Mmp13P33435 Gm6983-201ENSMUST00000214912 628 ntBASIC13.21□□□□□ -0.29
Mmp13P33435 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.21□□□□□ -0.29
Mmp13P33435 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp13P33435 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Mmp13P33435 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp13P33435 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Mmp13P33435 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp13P33435 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp13P33435 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Mmp13P33435 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Mmp13P33435 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Mmp13P33435 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Mmp13P33435 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Mmp13P33435 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Mmp13P33435 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Mmp13P33435 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Mmp13P33435 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Mmp13P33435 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Mmp13P33435 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Mmp13P33435 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Mmp13P33435 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.2□□□□□ -0.3
Mmp13P33435 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Gm12928-201ENSMUST00000117115 573 ntBASIC13.2□□□□□ -0.3
Mmp13P33435 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.2□□□□□ -0.3
Mmp13P33435 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.2□□□□□ -0.3
Mmp13P33435 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Mmp13P33435 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.2□□□□□ -0.3
Mmp13P33435 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.2□□□□□ -0.3
Mmp13P33435 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Mmp13P33435 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.19□□□□□ -0.3
Mmp13P33435 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Mmp13P33435 Gm6447-201ENSMUST00000118905 835 ntBASIC13.19□□□□□ -0.3
Mmp13P33435 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.19□□□□□ -0.3
Mmp13P33435 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Mmp13P33435 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Mmp13P33435 Gm8602-201ENSMUST00000184045 607 ntBASIC13.19□□□□□ -0.3
Mmp13P33435 Gm27892-201ENSMUST00000185017 106 ntBASIC13.19□□□□□ -0.3
Mmp13P33435 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.19□□□□□ -0.3
Mmp13P33435 Gm18187-201ENSMUST00000196476 984 ntBASIC13.19□□□□□ -0.3
Mmp13P33435 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.19□□□□□ -0.3
Mmp13P33435 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms