Protein–RNA interactions for Protein: P32972

Tnfsf8, Tumor necrosis factor ligand superfamily member 8, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf8P32972 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfsf8P32972 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfsf8P32972 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Tnfsf8P32972 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfsf8P32972 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Tnfsf8P32972 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfsf8P32972 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfsf8P32972 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfsf8P32972 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfsf8P32972 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfsf8P32972 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfsf8P32972 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfsf8P32972 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.69□□□□□ -0.7
Tnfsf8P32972 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.69□□□□□ -0.7
Tnfsf8P32972 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.69□□□□□ -0.7
Tnfsf8P32972 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.69□□□□□ -0.7
Tnfsf8P32972 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Gm19078-201ENSMUST00000206311 727 ntBASIC10.69□□□□□ -0.7
Tnfsf8P32972 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC10.69□□□□□ -0.7
Tnfsf8P32972 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.69□□□□□ -0.7
Tnfsf8P32972 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.69□□□□□ -0.7
Tnfsf8P32972 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfsf8P32972 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfsf8P32972 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfsf8P32972 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.68□□□□□ -0.7
Tnfsf8P32972 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC10.68□□□□□ -0.7
Tnfsf8P32972 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Gm27838-201ENSMUST00000184829 128 ntBASIC10.68□□□□□ -0.7
Tnfsf8P32972 Gm28760-201ENSMUST00000185995 736 ntBASIC10.68□□□□□ -0.7
Tnfsf8P32972 Gm42550-201ENSMUST00000201553 960 ntBASIC10.68□□□□□ -0.7
Tnfsf8P32972 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Tnfsf8P32972 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms