Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.11□□□□□ -0.63
Slc6a1P31648 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.11□□□□□ -0.63
Slc6a1P31648 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.11□□□□□ -0.63
Slc6a1P31648 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.11□□□□□ -0.63
Slc6a1P31648 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.11□□□□□ -0.63
Slc6a1P31648 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.11□□□□□ -0.63
Slc6a1P31648 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.11□□□□□ -0.63
Slc6a1P31648 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Slc6a1P31648 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Slc6a1P31648 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.11□□□□□ -0.63
Slc6a1P31648 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Slc6a1P31648 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Slc6a1P31648 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Slc6a1P31648 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Slc6a1P31648 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.1□□□□□ -0.63
Slc6a1P31648 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc6a1P31648 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Slc6a1P31648 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Slc6a1P31648 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Slc6a1P31648 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc6a1P31648 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.1□□□□□ -0.63
Slc6a1P31648 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc6a1P31648 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Slc6a1P31648 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Slc6a1P31648 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.1□□□□□ -0.63
Slc6a1P31648 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Slc6a1P31648 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Slc6a1P31648 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Slc6a1P31648 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc6a1P31648 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Slc6a1P31648 Gm3436-201ENSMUST00000179930 840 ntBASIC11.1□□□□□ -0.63
Slc6a1P31648 Gm27989-201ENSMUST00000184721 107 ntBASIC11.1□□□□□ -0.63
Slc6a1P31648 Gm27838-201ENSMUST00000184829 128 ntBASIC11.1□□□□□ -0.63
Slc6a1P31648 Gm27321-201ENSMUST00000185021 205 ntBASIC11.1□□□□□ -0.63
Slc6a1P31648 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Slc6a1P31648 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc6a1P31648 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc6a1P31648 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Slc6a1P31648 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Slc6a1P31648 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Slc6a1P31648 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc6a1P31648 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc6a1P31648 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc6a1P31648 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.1□□□□□ -0.63
Slc6a1P31648 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.1□□□□□ -0.63
Slc6a1P31648 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc6a1P31648 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc6a1P31648 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc6a1P31648 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc6a1P31648 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc6a1P31648 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc6a1P31648 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Slc6a1P31648 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.1□□□□□ -0.63
Slc6a1P31648 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.1□□□□□ -0.63
Slc6a1P31648 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Slc6a1P31648 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Slc6a1P31648 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.09□□□□□ -0.63
Slc6a1P31648 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Slc6a1P31648 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms