Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm28450-201ENSMUST00000187349 638 ntBASIC14.44□□□□□ -0.1
Col2a1P28481 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col2a1P28481 AY036118-201ENSMUST00000200021 923 ntBASIC14.44□□□□□ -0.1
Col2a1P28481 Gm43962-201ENSMUST00000203898 190 ntBASIC14.44□□□□□ -0.1
Col2a1P28481 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC14.44□□□□□ -0.1
Col2a1P28481 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.44□□□□□ -0.1
Col2a1P28481 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col2a1P28481 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col2a1P28481 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col2a1P28481 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.44□□□□□ -0.1
Col2a1P28481 Gm18227-201ENSMUST00000211082 1468 ntBASIC14.44□□□□□ -0.1
Col2a1P28481 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col2a1P28481 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col2a1P28481 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col2a1P28481 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col2a1P28481 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.44□□□□□ -0.1
Col2a1P28481 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col2a1P28481 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col2a1P28481 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col2a1P28481 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Col2a1P28481 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Col2a1P28481 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col2a1P28481 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Col2a1P28481 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col2a1P28481 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col2a1P28481 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col2a1P28481 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col2a1P28481 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col2a1P28481 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14.44□□□□□ -0.1
Col2a1P28481 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.44□□□□□ -0.1
Col2a1P28481 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col2a1P28481 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col2a1P28481 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col2a1P28481 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Col2a1P28481 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.44□□□□□ -0.1
Col2a1P28481 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.44□□□□□ -0.1
Col2a1P28481 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col2a1P28481 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.44□□□□□ -0.1
Col2a1P28481 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Col2a1P28481 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Col2a1P28481 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col2a1P28481 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.43□□□□□ -0.1
Col2a1P28481 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col2a1P28481 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.43□□□□□ -0.1
Col2a1P28481 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col2a1P28481 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col2a1P28481 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col2a1P28481 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col2a1P28481 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col2a1P28481 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.43□□□□□ -0.1
Col2a1P28481 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col2a1P28481 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.43□□□□□ -0.1
Col2a1P28481 Mir5132-201ENSMUST00000175166 71 ntBASIC14.43□□□□□ -0.1
Col2a1P28481 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Col2a1P28481 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.43□□□□□ -0.1
Col2a1P28481 Nsd1-205ENSMUST00000224693 852 ntBASIC14.43□□□□□ -0.1
Col2a1P28481 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.43□□□□□ -0.1
Col2a1P28481 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Col2a1P28481 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Col2a1P28481 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col2a1P28481 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col2a1P28481 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col2a1P28481 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Col2a1P28481 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col2a1P28481 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col2a1P28481 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col2a1P28481 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC14.42□□□□□ -0.1
Col2a1P28481 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col2a1P28481 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col2a1P28481 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col2a1P28481 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col2a1P28481 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Col2a1P28481 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col2a1P28481 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col2a1P28481 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col2a1P28481 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col2a1P28481 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col2a1P28481 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col2a1P28481 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col2a1P28481 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Col2a1P28481 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.42□□□□□ -0.1
Col2a1P28481 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col2a1P28481 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.42□□□□□ -0.1
Col2a1P28481 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col2a1P28481 Gm11989-201ENSMUST00000117240 672 ntBASIC14.42□□□□□ -0.1
Col2a1P28481 Gm11362-201ENSMUST00000118838 850 ntBASIC14.42□□□□□ -0.1
Col2a1P28481 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Col2a1P28481 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col2a1P28481 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Col2a1P28481 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.42□□□□□ -0.1
Col2a1P28481 Gm17040-202ENSMUST00000170597 889 ntBASIC14.42□□□□□ -0.1
Col2a1P28481 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.42□□□□□ -0.1
Col2a1P28481 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col2a1P28481 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col2a1P28481 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col2a1P28481 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col2a1P28481 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col2a1P28481 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Col2a1P28481 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col2a1P28481 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms