Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm37042-201ENSMUST00000193816 581 ntBASIC14.11□□□□□ -0.15
Pde6bP23440 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6bP23440 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.11□□□□□ -0.15
Pde6bP23440 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Pde6bP23440 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6bP23440 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6bP23440 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6bP23440 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6bP23440 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6bP23440 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6bP23440 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6bP23440 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Pde6bP23440 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pde6bP23440 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pde6bP23440 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Pde6bP23440 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6bP23440 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6bP23440 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6bP23440 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6bP23440 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6bP23440 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6bP23440 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Pde6bP23440 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6bP23440 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6bP23440 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.1□□□□□ -0.15
Pde6bP23440 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.1□□□□□ -0.15
Pde6bP23440 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6bP23440 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6bP23440 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.1□□□□□ -0.15
Pde6bP23440 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.1□□□□□ -0.15
Pde6bP23440 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6bP23440 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.1□□□□□ -0.15
Pde6bP23440 Gm17208-201ENSMUST00000168388 535 ntBASIC14.1□□□□□ -0.15
Pde6bP23440 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6bP23440 Gm29199-201ENSMUST00000187766 775 ntBASIC14.1□□□□□ -0.15
Pde6bP23440 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.1□□□□□ -0.15
Pde6bP23440 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6bP23440 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pde6bP23440 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pde6bP23440 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6bP23440 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6bP23440 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6bP23440 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6bP23440 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6bP23440 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6bP23440 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6bP23440 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Pde6bP23440 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.1□□□□□ -0.15
Pde6bP23440 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6bP23440 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Pde6bP23440 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6bP23440 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.09□□□□□ -0.15
Pde6bP23440 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6bP23440 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Pde6bP23440 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6bP23440 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6bP23440 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Pde6bP23440 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.09□□□□□ -0.15
Pde6bP23440 Gm25668-201ENSMUST00000157700 129 ntBASIC14.09□□□□□ -0.15
Pde6bP23440 Gm24548-201ENSMUST00000158650 108 ntBASIC14.09□□□□□ -0.15
Pde6bP23440 Gm20482-202ENSMUST00000174729 825 ntBASIC14.09□□□□□ -0.15
Pde6bP23440 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Pde6bP23440 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.09□□□□□ -0.15
Pde6bP23440 Gm21769-201ENSMUST00000211922 111 ntBASIC14.09□□□□□ -0.15
Pde6bP23440 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6bP23440 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pde6bP23440 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6bP23440 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6bP23440 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6bP23440 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6bP23440 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6bP23440 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.09□□□□□ -0.15
Pde6bP23440 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Pde6bP23440 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6bP23440 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6bP23440 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6bP23440 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6bP23440 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6bP23440 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6bP23440 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6bP23440 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6bP23440 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6bP23440 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Pde6bP23440 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Pde6bP23440 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Pde6bP23440 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Pde6bP23440 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Pde6bP23440 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6bP23440 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Pde6bP23440 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6bP23440 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6bP23440 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Pde6bP23440 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6bP23440 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6bP23440 Gm10434-201ENSMUST00000101158 471 ntBASIC14.08□□□□□ -0.16
Pde6bP23440 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6bP23440 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Pde6bP23440 Gm16570-201ENSMUST00000161951 436 ntBASIC14.08□□□□□ -0.16
Pde6bP23440 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.08□□□□□ -0.16
Pde6bP23440 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms