Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BdnfP21237 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BdnfP21237 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BdnfP21237 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
BdnfP21237 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BdnfP21237 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
BdnfP21237 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
BdnfP21237 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
BdnfP21237 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
BdnfP21237 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
BdnfP21237 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
BdnfP21237 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.4□□□□□ -0.42
BdnfP21237 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.4□□□□□ -0.42
BdnfP21237 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BdnfP21237 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
BdnfP21237 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
BdnfP21237 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
BdnfP21237 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
BdnfP21237 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BdnfP21237 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
BdnfP21237 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BdnfP21237 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BdnfP21237 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.4□□□□□ -0.42
BdnfP21237 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BdnfP21237 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
BdnfP21237 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
BdnfP21237 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
BdnfP21237 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BdnfP21237 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.4□□□□□ -0.42
BdnfP21237 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.4□□□□□ -0.42
BdnfP21237 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.4□□□□□ -0.42
BdnfP21237 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
BdnfP21237 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
BdnfP21237 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
BdnfP21237 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
BdnfP21237 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
BdnfP21237 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.4□□□□□ -0.42
BdnfP21237 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.4□□□□□ -0.42
BdnfP21237 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.4□□□□□ -0.42
BdnfP21237 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.4□□□□□ -0.42
BdnfP21237 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
BdnfP21237 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BdnfP21237 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BdnfP21237 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
BdnfP21237 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
BdnfP21237 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
BdnfP21237 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
BdnfP21237 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
BdnfP21237 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.4□□□□□ -0.42
BdnfP21237 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
BdnfP21237 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
BdnfP21237 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.4□□□□□ -0.43
BdnfP21237 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
BdnfP21237 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
BdnfP21237 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
BdnfP21237 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.4□□□□□ -0.43
BdnfP21237 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
BdnfP21237 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
BdnfP21237 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BdnfP21237 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
BdnfP21237 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BdnfP21237 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.39□□□□□ -0.43
BdnfP21237 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BdnfP21237 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BdnfP21237 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
BdnfP21237 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
BdnfP21237 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.39□□□□□ -0.43
BdnfP21237 Gm14057-201ENSMUST00000120631 482 ntBASIC12.39□□□□□ -0.43
BdnfP21237 Gm38144-201ENSMUST00000192790 465 ntBASIC12.39□□□□□ -0.43
BdnfP21237 Gm44855-201ENSMUST00000205725 362 ntBASIC12.39□□□□□ -0.43
BdnfP21237 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.39□□□□□ -0.43
BdnfP21237 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.39□□□□□ -0.43
BdnfP21237 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.39□□□□□ -0.43
BdnfP21237 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BdnfP21237 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
BdnfP21237 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BdnfP21237 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BdnfP21237 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BdnfP21237 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.39□□□□□ -0.43
BdnfP21237 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
BdnfP21237 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
BdnfP21237 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BdnfP21237 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
BdnfP21237 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
BdnfP21237 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BdnfP21237 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BdnfP21237 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
BdnfP21237 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
BdnfP21237 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
BdnfP21237 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BdnfP21237 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.38□□□□□ -0.43
BdnfP21237 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
BdnfP21237 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BdnfP21237 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
BdnfP21237 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BdnfP21237 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
BdnfP21237 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
BdnfP21237 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.38□□□□□ -0.43
BdnfP21237 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.38□□□□□ -0.43
BdnfP21237 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms