Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx1P18111 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx1P18111 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx1P18111 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.45□□□□□ -0.74
Cdx1P18111 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Cdx1P18111 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Cdx1P18111 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx1P18111 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC10.45□□□□□ -0.74
Cdx1P18111 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx1P18111 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx1P18111 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx1P18111 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx1P18111 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx1P18111 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx1P18111 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx1P18111 Gm13464-201ENSMUST00000119418 935 ntBASIC10.45□□□□□ -0.74
Cdx1P18111 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC10.45□□□□□ -0.74
Cdx1P18111 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Cdx1P18111 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx1P18111 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Cdx1P18111 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx1P18111 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC10.45□□□□□ -0.74
Cdx1P18111 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC10.45□□□□□ -0.74
Cdx1P18111 AC131690.1-201ENSMUST00000218406 374 ntBASIC10.45□□□□□ -0.74
Cdx1P18111 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Cdx1P18111 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx1P18111 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx1P18111 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx1P18111 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx1P18111 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx1P18111 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx1P18111 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx1P18111 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx1P18111 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx1P18111 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.45□□□□□ -0.74
Cdx1P18111 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx1P18111 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx1P18111 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Cdx1P18111 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cdx1P18111 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Cdx1P18111 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Cdx1P18111 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Cdx1P18111 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Cdx1P18111 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Cdx1P18111 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC10.44□□□□□ -0.74
Cdx1P18111 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm6222-201ENSMUST00000120787 396 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Mir1897-201ENSMUST00000122581 272 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.44□□□□□ -0.74
Cdx1P18111 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Cdx1P18111 Gm29310-201ENSMUST00000185468 696 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm21825-201ENSMUST00000185728 696 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm29109-201ENSMUST00000185895 696 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm21896-201ENSMUST00000186520 696 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm21873-201ENSMUST00000186728 696 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm21794-201ENSMUST00000187056 696 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm21880-201ENSMUST00000187275 696 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm21826-201ENSMUST00000187451 696 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm21198-201ENSMUST00000188393 696 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm21749-201ENSMUST00000189343 696 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm21901-201ENSMUST00000189568 696 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm29424-201ENSMUST00000189716 696 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm28599-201ENSMUST00000189838 694 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm21867-201ENSMUST00000189917 696 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm29269-201ENSMUST00000190087 696 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm21722-201ENSMUST00000190153 696 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm28423-201ENSMUST00000190701 696 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm21899-201ENSMUST00000190745 696 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm21910-201ENSMUST00000191163 696 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm21849-201ENSMUST00000191571 696 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm28678-201ENSMUST00000191593 696 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm20910-201ENSMUST00000193268 696 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Ighv5-13-201ENSMUST00000193550 290 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm21871-201ENSMUST00000194621 696 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm9794-201ENSMUST00000202370 423 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm9182-201ENSMUST00000217829 639 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm46209-201ENSMUST00000217912 553 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC10.44□□□□□ -0.74
Cdx1P18111 Gm16476-201ENSMUST00000221544 139 ntBASIC10.44□□□□□ -0.74
Cdx1P18111 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Cdx1P18111 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx1P18111 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms