Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Msx1P13297 Gm10268-201ENSMUST00000085340 555 ntBASIC12.37□□□□□ -0.43
Msx1P13297 Mir433-201ENSMUST00000093564 124 ntBASIC12.37□□□□□ -0.43
Msx1P13297 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msx1P13297 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msx1P13297 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msx1P13297 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.37□□□□□ -0.43
Msx1P13297 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Msx1P13297 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Msx1P13297 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msx1P13297 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msx1P13297 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Msx1P13297 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msx1P13297 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.37□□□□□ -0.43
Msx1P13297 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msx1P13297 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msx1P13297 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Msx1P13297 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.37□□□□□ -0.43
Msx1P13297 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.37□□□□□ -0.43
Msx1P13297 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msx1P13297 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msx1P13297 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msx1P13297 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msx1P13297 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Msx1P13297 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msx1P13297 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Msx1P13297 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Msx1P13297 Gm12241-201ENSMUST00000118330 726 ntBASIC12.36□□□□□ -0.43
Msx1P13297 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.36□□□□□ -0.43
Msx1P13297 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Msx1P13297 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Msx1P13297 Gm23757-201ENSMUST00000158353 100 ntBASIC12.36□□□□□ -0.43
Msx1P13297 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Msx1P13297 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Msx1P13297 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msx1P13297 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Msx1P13297 Gm37073-201ENSMUST00000192469 1222 ntBASIC12.36□□□□□ -0.43
Msx1P13297 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.36□□□□□ -0.43
Msx1P13297 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.36□□□□□ -0.43
Msx1P13297 Olfr284-202ENSMUST00000206647 966 ntBASIC12.36□□□□□ -0.43
Msx1P13297 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Msx1P13297 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.36□□□□□ -0.43
Msx1P13297 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.36□□□□□ -0.43
Msx1P13297 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msx1P13297 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msx1P13297 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Msx1P13297 Snora73a-201ENSMUST00000082453 205 ntBASIC12.36□□□□□ -0.43
Msx1P13297 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.36□□□□□ -0.43
Msx1P13297 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msx1P13297 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msx1P13297 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.36□□□□□ -0.43
Msx1P13297 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msx1P13297 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msx1P13297 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Msx1P13297 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Msx1P13297 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msx1P13297 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msx1P13297 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Msx1P13297 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.36□□□□□ -0.43
Msx1P13297 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.36□□□□□ -0.43
Msx1P13297 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msx1P13297 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Msx1P13297 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Msx1P13297 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Msx1P13297 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.35□□□□□ -0.43
Msx1P13297 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Msx1P13297 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.35□□□□□ -0.43
Msx1P13297 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Gm8312-201ENSMUST00000119380 618 ntBASIC12.35□□□□□ -0.43
Msx1P13297 Gm25109-201ENSMUST00000122474 114 ntBASIC12.35□□□□□ -0.43
Msx1P13297 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Msx1P13297 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Gm26927-201ENSMUST00000182385 965 ntBASIC12.35□□□□□ -0.43
Msx1P13297 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Gm42474-201ENSMUST00000201073 505 ntBASIC12.35□□□□□ -0.43
Msx1P13297 Gm6334-201ENSMUST00000207083 228 ntBASIC12.35□□□□□ -0.43
Msx1P13297 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.35□□□□□ -0.43
Msx1P13297 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.35□□□□□ -0.43
Msx1P13297 CT025642.1-201ENSMUST00000224734 1219 ntBASIC12.35□□□□□ -0.43
Msx1P13297 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Msx1P13297 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms