Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.39□□□□□ -0.43
Cntn1P12960 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cntn1P12960 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Cntn1P12960 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cntn1P12960 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cntn1P12960 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn1P12960 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn1P12960 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn1P12960 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn1P12960 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn1P12960 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn1P12960 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn1P12960 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn1P12960 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn1P12960 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn1P12960 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn1P12960 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn1P12960 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.38□□□□□ -0.43
Cntn1P12960 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn1P12960 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.38□□□□□ -0.43
Cntn1P12960 Gm3890-201ENSMUST00000182416 207 ntBASIC12.38□□□□□ -0.43
Cntn1P12960 Gm27501-201ENSMUST00000183599 107 ntBASIC12.38□□□□□ -0.43
Cntn1P12960 Gm27516-201ENSMUST00000184237 98 ntBASIC12.38□□□□□ -0.43
Cntn1P12960 Gm42627-201ENSMUST00000197347 224 ntBASIC12.38□□□□□ -0.43
Cntn1P12960 Gm32025-201ENSMUST00000217960 307 ntBASIC12.38□□□□□ -0.43
Cntn1P12960 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn1P12960 Gm45930-201ENSMUST00000221330 292 ntBASIC12.38□□□□□ -0.43
Cntn1P12960 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn1P12960 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn1P12960 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn1P12960 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn1P12960 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn1P12960 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn1P12960 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cntn1P12960 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.38□□□□□ -0.43
Cntn1P12960 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cntn1P12960 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cntn1P12960 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Cntn1P12960 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cntn1P12960 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.37□□□□□ -0.43
Cntn1P12960 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 Gm6023-201ENSMUST00000118217 606 ntBASIC12.37□□□□□ -0.43
Cntn1P12960 Gm14704-201ENSMUST00000120300 874 ntBASIC12.37□□□□□ -0.43
Cntn1P12960 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.37□□□□□ -0.43
Cntn1P12960 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.37□□□□□ -0.43
Cntn1P12960 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.37□□□□□ -0.43
Cntn1P12960 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.37□□□□□ -0.43
Cntn1P12960 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.37□□□□□ -0.43
Cntn1P12960 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Cntn1P12960 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cntn1P12960 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cntn1P12960 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Cntn1P12960 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cntn1P12960 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cntn1P12960 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.37□□□□□ -0.43
Cntn1P12960 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cntn1P12960 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms