Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Cxcl1P12850 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcl1P12850 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Cxcl1P12850 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcl1P12850 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.68□□□□□ -0.7
Cxcl1P12850 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcl1P12850 Abhd6-203ENSMUST00000225234 1958 ntBASIC10.68□□□□□ -0.7
Cxcl1P12850 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcl1P12850 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcl1P12850 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcl1P12850 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.68□□□□□ -0.7
Cxcl1P12850 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcl1P12850 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcl1P12850 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cxcl1P12850 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Cxcl1P12850 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.67□□□□□ -0.7
Cxcl1P12850 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Cxcl1P12850 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Cxcl1P12850 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.67□□□□□ -0.7
Cxcl1P12850 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.67□□□□□ -0.7
Cxcl1P12850 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Gm23935-201ENSMUST00000102303 57 ntBASIC10.67□□□□□ -0.7
Cxcl1P12850 Gm24270-201ENSMUST00000102326 57 ntBASIC10.67□□□□□ -0.7
Cxcl1P12850 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC10.67□□□□□ -0.7
Cxcl1P12850 Gm13616-201ENSMUST00000120600 222 ntBASIC10.67□□□□□ -0.7
Cxcl1P12850 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.67□□□□□ -0.7
Cxcl1P12850 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC10.67□□□□□ -0.7
Cxcl1P12850 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Cxcl1P12850 Gm24245-201ENSMUST00000157318 57 ntBASIC10.67□□□□□ -0.7
Cxcl1P12850 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Gm29667-201ENSMUST00000190817 490 ntBASIC10.67□□□□□ -0.7
Cxcl1P12850 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Cxcl1P12850 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.67□□□□□ -0.7
Cxcl1P12850 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Cxcl1P12850 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Cxcl1P12850 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Cxcl1P12850 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Cxcl1P12850 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.66□□□□□ -0.7
Cxcl1P12850 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.66□□□□□ -0.7
Cxcl1P12850 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cxcl1P12850 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cxcl1P12850 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cxcl1P12850 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cxcl1P12850 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Cxcl1P12850 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cxcl1P12850 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cxcl1P12850 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cxcl1P12850 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Cxcl1P12850 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.66□□□□□ -0.7
Cxcl1P12850 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cxcl1P12850 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cxcl1P12850 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cxcl1P12850 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cxcl1P12850 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.66□□□□□ -0.7
Cxcl1P12850 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cxcl1P12850 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.66□□□□□ -0.7
Cxcl1P12850 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.66□□□□□ -0.7
Cxcl1P12850 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Cxcl1P12850 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cxcl1P12850 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Cxcl1P12850 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Cxcl1P12850 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cxcl1P12850 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cxcl1P12850 Gm13813-201ENSMUST00000120998 787 ntBASIC10.66□□□□□ -0.7
Cxcl1P12850 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cxcl1P12850 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC10.66□□□□□ -0.7
Cxcl1P12850 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cxcl1P12850 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Cxcl1P12850 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.66□□□□□ -0.7
Cxcl1P12850 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC10.66□□□□□ -0.7
Cxcl1P12850 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Cxcl1P12850 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.66□□□□□ -0.7
Cxcl1P12850 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Cxcl1P12850 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.66□□□□□ -0.7
Cxcl1P12850 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cxcl1P12850 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Cxcl1P12850 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms