Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc9P09633 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC16.61■□□□□ 0.25
Hoxc9P09633 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxc9P09633 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc9P09633 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc9P09633 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc9P09633 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc9P09633 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Hoxc9P09633 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc9P09633 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc9P09633 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Hoxc9P09633 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc9P09633 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
Hoxc9P09633 Gm12286-201ENSMUST00000119246 1002 ntBASIC16.6■□□□□ 0.25
Hoxc9P09633 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Hoxc9P09633 Gm22334-201ENSMUST00000158070 133 ntBASIC16.6■□□□□ 0.25
Hoxc9P09633 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc9P09633 Aprt-ps-201ENSMUST00000212311 505 ntBASIC16.6■□□□□ 0.25
Hoxc9P09633 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC16.6■□□□□ 0.25
Hoxc9P09633 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc9P09633 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc9P09633 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc9P09633 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc9P09633 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc9P09633 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc9P09633 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc9P09633 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc9P09633 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Hoxc9P09633 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc9P09633 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc9P09633 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxc9P09633 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Hoxc9P09633 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC16.6■□□□□ 0.25
Hoxc9P09633 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC16.6■□□□□ 0.25
Hoxc9P09633 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Hoxc9P09633 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Hoxc9P09633 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC16.59■□□□□ 0.25
Hoxc9P09633 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Hoxc9P09633 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc9P09633 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Hoxc9P09633 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc9P09633 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc9P09633 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc9P09633 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC16.59■□□□□ 0.25
Hoxc9P09633 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Hoxc9P09633 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC16.59■□□□□ 0.25
Hoxc9P09633 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Hoxc9P09633 Gm5523-201ENSMUST00000180415 997 ntBASIC16.59■□□□□ 0.25
Hoxc9P09633 AC107638.1-201ENSMUST00000213690 1061 ntBASIC16.59■□□□□ 0.25
Hoxc9P09633 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc9P09633 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc9P09633 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc9P09633 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc9P09633 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.59■□□□□ 0.25
Hoxc9P09633 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC16.59■□□□□ 0.25
Hoxc9P09633 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc9P09633 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Hoxc9P09633 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Hoxc9P09633 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hoxc9P09633 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hoxc9P09633 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Hoxc9P09633 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Hoxc9P09633 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Hoxc9P09633 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxc9P09633 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxc9P09633 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Hoxc9P09633 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxc9P09633 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxc9P09633 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC16.58■□□□□ 0.24
Hoxc9P09633 Gm17040-202ENSMUST00000170597 889 ntBASIC16.58■□□□□ 0.24
Hoxc9P09633 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxc9P09633 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxc9P09633 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxc9P09633 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC16.58■□□□□ 0.24
Hoxc9P09633 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Hoxc9P09633 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Hoxc9P09633 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC16.58■□□□□ 0.24
Hoxc9P09633 AC137842.1-201ENSMUST00000227896 2064 ntBASIC16.58■□□□□ 0.24
Hoxc9P09633 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Hoxc9P09633 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxc9P09633 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Hoxc9P09633 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxc9P09633 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Hoxc9P09633 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC16.58■□□□□ 0.24
Hoxc9P09633 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxc9P09633 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Hoxc9P09633 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Hoxc9P09633 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Hoxc9P09633 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Hoxc9P09633 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc9P09633 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc9P09633 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc9P09633 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc9P09633 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Hoxc9P09633 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc9P09633 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc9P09633 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc9P09633 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Hoxc9P09633 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC16.57■□□□□ 0.24
Hoxc9P09633 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms