Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Polr2aP08775 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Polr2aP08775 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.44□□□□□ -0.1
Polr2aP08775 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Polr2aP08775 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Polr2aP08775 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Polr2aP08775 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Polr2aP08775 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Polr2aP08775 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Polr2aP08775 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Polr2aP08775 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.44□□□□□ -0.1
Polr2aP08775 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Polr2aP08775 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.43□□□□□ -0.1
Polr2aP08775 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Polr2aP08775 Gm28686-201ENSMUST00000187404 609 ntBASIC14.43□□□□□ -0.1
Polr2aP08775 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.43□□□□□ -0.1
Polr2aP08775 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Polr2aP08775 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.43□□□□□ -0.1
Polr2aP08775 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.43□□□□□ -0.1
Polr2aP08775 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Polr2aP08775 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.43□□□□□ -0.1
Polr2aP08775 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Polr2aP08775 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Polr2aP08775 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Polr2aP08775 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Polr2aP08775 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Polr2aP08775 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Polr2aP08775 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Polr2aP08775 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Polr2aP08775 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Polr2aP08775 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Polr2aP08775 Gm11246-201ENSMUST00000120880 345 ntBASIC14.43□□□□□ -0.1
Polr2aP08775 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Polr2aP08775 Gm4157-201ENSMUST00000211647 679 ntBASIC14.43□□□□□ -0.1
Polr2aP08775 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.43□□□□□ -0.1
Polr2aP08775 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Polr2aP08775 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Polr2aP08775 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Polr2aP08775 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.43□□□□□ -0.1
Polr2aP08775 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Polr2aP08775 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Polr2aP08775 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Polr2aP08775 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Polr2aP08775 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Polr2aP08775 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.42□□□□□ -0.1
Polr2aP08775 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Polr2aP08775 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Polr2aP08775 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Polr2aP08775 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC14.42□□□□□ -0.1
Polr2aP08775 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Polr2aP08775 Gm11509-201ENSMUST00000117358 325 ntBASIC14.42□□□□□ -0.1
Polr2aP08775 Gm12816-201ENSMUST00000118069 1212 ntBASIC14.42□□□□□ -0.1
Polr2aP08775 Mir7076-201ENSMUST00000183519 74 ntBASIC14.42□□□□□ -0.1
Polr2aP08775 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Polr2aP08775 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Polr2aP08775 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Polr2aP08775 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC14.42□□□□□ -0.1
Polr2aP08775 Gm5879-201ENSMUST00000089501 1209 ntBASIC14.42□□□□□ -0.1
Polr2aP08775 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Polr2aP08775 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Polr2aP08775 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Polr2aP08775 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Polr2aP08775 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Polr2aP08775 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.42□□□□□ -0.1
Polr2aP08775 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Polr2aP08775 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Polr2aP08775 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Polr2aP08775 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Polr2aP08775 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Polr2aP08775 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Polr2aP08775 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Polr2aP08775 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Polr2aP08775 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.42□□□□□ -0.1
Polr2aP08775 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Polr2aP08775 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Polr2aP08775 Gm14724-201ENSMUST00000118400 537 ntBASIC14.42□□□□□ -0.1
Polr2aP08775 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Polr2aP08775 Mir7677-201ENSMUST00000184226 67 ntBASIC14.42□□□□□ -0.1
Polr2aP08775 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Polr2aP08775 AC124457.1-201ENSMUST00000198845 120 ntBASIC14.42□□□□□ -0.1
Polr2aP08775 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.42□□□□□ -0.1
Polr2aP08775 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Polr2aP08775 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Polr2aP08775 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Polr2aP08775 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Polr2aP08775 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Polr2aP08775 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Polr2aP08775 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Polr2aP08775 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Polr2aP08775 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Polr2aP08775 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Polr2aP08775 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Polr2aP08775 Gm3765-201ENSMUST00000130985 1447 ntBASIC14.41□□□□□ -0.1
Polr2aP08775 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Polr2aP08775 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Polr2aP08775 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Polr2aP08775 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Polr2aP08775 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Polr2aP08775 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Polr2aP08775 Gm23596-201ENSMUST00000104304 132 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms