Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TnfP06804 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TnfP06804 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TnfP06804 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TnfP06804 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.67□□□□□ -0.22
TnfP06804 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TnfP06804 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TnfP06804 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TnfP06804 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.67□□□□□ -0.22
TnfP06804 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TnfP06804 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TnfP06804 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TnfP06804 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TnfP06804 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
TnfP06804 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TnfP06804 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TnfP06804 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TnfP06804 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TnfP06804 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
TnfP06804 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TnfP06804 Gm22323-201ENSMUST00000103832 109 ntBASIC13.67□□□□□ -0.22
TnfP06804 Gm14381-201ENSMUST00000122105 414 ntBASIC13.67□□□□□ -0.22
TnfP06804 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.67□□□□□ -0.22
TnfP06804 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.67□□□□□ -0.22
TnfP06804 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.67□□□□□ -0.22
TnfP06804 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
TnfP06804 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TnfP06804 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TnfP06804 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.67□□□□□ -0.22
TnfP06804 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TnfP06804 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TnfP06804 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TnfP06804 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TnfP06804 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.67□□□□□ -0.22
TnfP06804 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TnfP06804 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TnfP06804 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TnfP06804 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TnfP06804 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
TnfP06804 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TnfP06804 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
TnfP06804 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Gm11222-201ENSMUST00000119005 738 ntBASIC13.66□□□□□ -0.22
TnfP06804 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TnfP06804 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.66□□□□□ -0.22
TnfP06804 Gm27320-201ENSMUST00000184892 109 ntBASIC13.66□□□□□ -0.22
TnfP06804 Gm37259-201ENSMUST00000193903 849 ntBASIC13.66□□□□□ -0.22
TnfP06804 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.66□□□□□ -0.22
TnfP06804 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
TnfP06804 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TnfP06804 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.66□□□□□ -0.22
TnfP06804 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
TnfP06804 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TnfP06804 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.65□□□□□ -0.22
TnfP06804 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TnfP06804 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
TnfP06804 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.65□□□□□ -0.22
TnfP06804 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TnfP06804 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TnfP06804 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TnfP06804 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.65□□□□□ -0.22
TnfP06804 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TnfP06804 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TnfP06804 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TnfP06804 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TnfP06804 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TnfP06804 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TnfP06804 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TnfP06804 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TnfP06804 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.65□□□□□ -0.22
TnfP06804 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.65□□□□□ -0.22
TnfP06804 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TnfP06804 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TnfP06804 Gm13813-201ENSMUST00000120998 787 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms