Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.51□□□□□ -0.57
P06344 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.51□□□□□ -0.57
P06344 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
P06344 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.51□□□□□ -0.57
P06344 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
P06344 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
P06344 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
P06344 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
P06344 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
P06344 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.5□□□□□ -0.57
P06344 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P06344 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.5□□□□□ -0.57
P06344 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P06344 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P06344 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P06344 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
P06344 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P06344 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P06344 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P06344 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P06344 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P06344 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
P06344 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
P06344 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P06344 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P06344 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.5□□□□□ -0.57
P06344 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
P06344 Gm38002-201ENSMUST00000193255 180 ntBASIC11.5□□□□□ -0.57
P06344 Gm4768-201ENSMUST00000206199 686 ntBASIC11.5□□□□□ -0.57
P06344 Gm18054-201ENSMUST00000207539 555 ntBASIC11.5□□□□□ -0.57
P06344 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.5□□□□□ -0.57
P06344 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.5□□□□□ -0.57
P06344 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.5□□□□□ -0.57
P06344 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P06344 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P06344 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.5□□□□□ -0.57
P06344 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P06344 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P06344 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P06344 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.5□□□□□ -0.57
P06344 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
P06344 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
P06344 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P06344 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P06344 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P06344 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
P06344 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P06344 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
P06344 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.5□□□□□ -0.57
P06344 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
P06344 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P06344 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P06344 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P06344 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P06344 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
P06344 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P06344 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P06344 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P06344 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
P06344 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P06344 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
P06344 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P06344 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P06344 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.49□□□□□ -0.57
P06344 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
P06344 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P06344 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.49□□□□□ -0.57
P06344 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.49□□□□□ -0.57
P06344 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.49□□□□□ -0.57
P06344 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.49□□□□□ -0.57
P06344 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.49□□□□□ -0.57
P06344 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
P06344 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
P06344 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
P06344 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.49□□□□□ -0.57
P06344 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.49□□□□□ -0.57
P06344 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.49□□□□□ -0.57
P06344 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P06344 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P06344 Gm9823-201ENSMUST00000051212 327 ntBASIC11.49□□□□□ -0.57
P06344 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.49□□□□□ -0.57
P06344 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P06344 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P06344 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
P06344 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.49□□□□□ -0.57
P06344 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
P06344 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
P06344 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.49□□□□□ -0.57
P06344 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms