Protein–RNA interactions for Protein: P01800

Ig heavy chain V-III region T957, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01800 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P01800 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.32□□□□□ -0.6
P01800 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
P01800 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
P01800 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
P01800 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
P01800 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01800 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01800 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
P01800 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
P01800 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01800 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01800 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
P01800 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
P01800 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01800 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.31□□□□□ -0.6
P01800 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01800 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
P01800 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.31□□□□□ -0.6
P01800 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.31□□□□□ -0.6
P01800 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01800 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.31□□□□□ -0.6
P01800 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P01800 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.31□□□□□ -0.6
P01800 Gm43433-201ENSMUST00000196573 481 ntBASIC11.31□□□□□ -0.6
P01800 Gm45668-201ENSMUST00000211271 493 ntBASIC11.31□□□□□ -0.6
P01800 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.31□□□□□ -0.6
P01800 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
P01800 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01800 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.31□□□□□ -0.6
P01800 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P01800 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
P01800 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.31□□□□□ -0.6
P01800 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
P01800 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01800 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01800 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P01800 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P01800 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
P01800 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01800 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01800 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01800 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P01800 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01800 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01800 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
P01800 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
P01800 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.31□□□□□ -0.6
P01800 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P01800 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
P01800 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01800 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
P01800 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01800 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01800 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01800 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
P01800 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.31□□□□□ -0.6
P01800 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
P01800 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
P01800 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
P01800 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
P01800 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.3□□□□□ -0.6
P01800 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
P01800 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
P01800 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
P01800 Gm45384-201ENSMUST00000210451 277 ntBASIC11.3□□□□□ -0.6
P01800 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.3□□□□□ -0.6
P01800 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.3□□□□□ -0.6
P01800 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
P01800 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms