Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Gm21769-201ENSMUST00000211922 111 ntBASIC13.01□□□□□ -0.33
Sp1O89090 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Sp1O89090 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.01□□□□□ -0.33
Sp1O89090 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.01□□□□□ -0.33
Sp1O89090 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.01□□□□□ -0.33
Sp1O89090 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sp1O89090 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sp1O89090 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sp1O89090 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.01□□□□□ -0.33
Sp1O89090 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.01□□□□□ -0.33
Sp1O89090 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Sp1O89090 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.01□□□□□ -0.33
Sp1O89090 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.01□□□□□ -0.33
Sp1O89090 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sp1O89090 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sp1O89090 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sp1O89090 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sp1O89090 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sp1O89090 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Sp1O89090 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Sp1O89090 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sp1O89090 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sp1O89090 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sp1O89090 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sp1O89090 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sp1O89090 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13□□□□□ -0.33
Sp1O89090 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sp1O89090 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sp1O89090 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sp1O89090 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sp1O89090 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sp1O89090 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sp1O89090 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sp1O89090 Gm4366-201ENSMUST00000201488 1342 ntBASIC13□□□□□ -0.33
Sp1O89090 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Sp1O89090 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Sp1O89090 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sp1O89090 Gm13875-201ENSMUST00000120162 282 ntBASIC13□□□□□ -0.33
Sp1O89090 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Sp1O89090 Gm2546-201ENSMUST00000182630 991 ntBASIC13□□□□□ -0.33
Sp1O89090 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13□□□□□ -0.33
Sp1O89090 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13□□□□□ -0.33
Sp1O89090 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13□□□□□ -0.33
Sp1O89090 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13□□□□□ -0.33
Sp1O89090 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sp1O89090 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sp1O89090 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Sp1O89090 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sp1O89090 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sp1O89090 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sp1O89090 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sp1O89090 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sp1O89090 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sp1O89090 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sp1O89090 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Sp1O89090 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sp1O89090 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sp1O89090 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13□□□□□ -0.33
Sp1O89090 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sp1O89090 Gm44851-201ENSMUST00000205735 2309 ntBASIC13□□□□□ -0.33
Sp1O89090 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sp1O89090 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sp1O89090 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp1O89090 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Sp1O89090 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sp1O89090 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sp1O89090 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Sp1O89090 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp1O89090 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp1O89090 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.99□□□□□ -0.33
Sp1O89090 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp1O89090 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp1O89090 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Sp1O89090 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp1O89090 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.99□□□□□ -0.33
Sp1O89090 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Sp1O89090 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.99□□□□□ -0.33
Sp1O89090 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp1O89090 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.99□□□□□ -0.33
Sp1O89090 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp1O89090 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.99□□□□□ -0.33
Sp1O89090 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Sp1O89090 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.99□□□□□ -0.33
Sp1O89090 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp1O89090 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp1O89090 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sp1O89090 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp1O89090 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp1O89090 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp1O89090 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp1O89090 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Sp1O89090 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp1O89090 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.99□□□□□ -0.33
Sp1O89090 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp1O89090 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.99□□□□□ -0.33
Sp1O89090 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sp1O89090 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.99□□□□□ -0.33
Sp1O89090 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sp1O89090 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sp1O89090 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms