Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chrna4O70174 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Chrna4O70174 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chrna4O70174 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.02□□□□□ -0.33
Chrna4O70174 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chrna4O70174 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.02□□□□□ -0.33
Chrna4O70174 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Chrna4O70174 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Chrna4O70174 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chrna4O70174 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chrna4O70174 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Chrna4O70174 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chrna4O70174 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chrna4O70174 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Chrna4O70174 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chrna4O70174 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chrna4O70174 Gm16177-201ENSMUST00000120728 718 ntBASIC13.01□□□□□ -0.33
Chrna4O70174 Gm12291-201ENSMUST00000121627 311 ntBASIC13.01□□□□□ -0.33
Chrna4O70174 Gm17150-201ENSMUST00000165577 381 ntBASIC13.01□□□□□ -0.33
Chrna4O70174 Gm17208-201ENSMUST00000168388 535 ntBASIC13.01□□□□□ -0.33
Chrna4O70174 Gm29127-201ENSMUST00000188304 517 ntBASIC13.01□□□□□ -0.33
Chrna4O70174 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Chrna4O70174 Gm37042-201ENSMUST00000193816 581 ntBASIC13.01□□□□□ -0.33
Chrna4O70174 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.01□□□□□ -0.33
Chrna4O70174 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.01□□□□□ -0.33
Chrna4O70174 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.01□□□□□ -0.33
Chrna4O70174 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chrna4O70174 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Chrna4O70174 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chrna4O70174 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chrna4O70174 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chrna4O70174 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chrna4O70174 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chrna4O70174 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.01□□□□□ -0.33
Chrna4O70174 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Chrna4O70174 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chrna4O70174 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chrna4O70174 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chrna4O70174 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chrna4O70174 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Chrna4O70174 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chrna4O70174 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chrna4O70174 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Chrna4O70174 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Chrna4O70174 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Chrna4O70174 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Gm20633-201ENSMUST00000176742 2831 ntBASIC13□□□□□ -0.33
Chrna4O70174 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Chrna4O70174 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13□□□□□ -0.33
Chrna4O70174 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Chrna4O70174 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Chrna4O70174 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13□□□□□ -0.33
Chrna4O70174 Gm11637-201ENSMUST00000120601 592 ntBASIC13□□□□□ -0.33
Chrna4O70174 Gm12363-201ENSMUST00000122250 668 ntBASIC13□□□□□ -0.33
Chrna4O70174 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 AC122459.1-201ENSMUST00000228373 885 ntBASIC13□□□□□ -0.33
Chrna4O70174 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13□□□□□ -0.33
Chrna4O70174 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Chrna4O70174 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13□□□□□ -0.33
Chrna4O70174 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13□□□□□ -0.33
Chrna4O70174 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna4O70174 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna4O70174 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Chrna4O70174 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Chrna4O70174 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna4O70174 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna4O70174 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna4O70174 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Chrna4O70174 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.99□□□□□ -0.33
Chrna4O70174 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Chrna4O70174 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna4O70174 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.99□□□□□ -0.33
Chrna4O70174 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna4O70174 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms