Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smarce1O54941 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smarce1O54941 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Smarce1O54941 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarce1O54941 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarce1O54941 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.33■□□□□ 0.04
Smarce1O54941 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarce1O54941 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarce1O54941 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarce1O54941 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarce1O54941 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarce1O54941 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarce1O54941 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarce1O54941 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC15.33■□□□□ 0.04
Smarce1O54941 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.33■□□□□ 0.04
Smarce1O54941 AC154687.2-201ENSMUST00000223853 640 ntBASIC15.33■□□□□ 0.04
Smarce1O54941 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarce1O54941 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC15.33■□□□□ 0.04
Smarce1O54941 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarce1O54941 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarce1O54941 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarce1O54941 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarce1O54941 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Smarce1O54941 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Smarce1O54941 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Smarce1O54941 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smarce1O54941 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarce1O54941 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarce1O54941 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC15.32■□□□□ 0.04
Smarce1O54941 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarce1O54941 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Smarce1O54941 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarce1O54941 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarce1O54941 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Smarce1O54941 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Smarce1O54941 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Smarce1O54941 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarce1O54941 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.32■□□□□ 0.04
Smarce1O54941 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC15.32■□□□□ 0.04
Smarce1O54941 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarce1O54941 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Smarce1O54941 Mir7654-201ENSMUST00000185082 70 ntBASIC15.32■□□□□ 0.04
Smarce1O54941 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.32■□□□□ 0.04
Smarce1O54941 Gm6218-201ENSMUST00000219812 628 ntBASIC15.32■□□□□ 0.04
Smarce1O54941 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC15.32■□□□□ 0.04
Smarce1O54941 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarce1O54941 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarce1O54941 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.32■□□□□ 0.04
Smarce1O54941 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarce1O54941 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarce1O54941 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarce1O54941 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC15.32■□□□□ 0.04
Smarce1O54941 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarce1O54941 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarce1O54941 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarce1O54941 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarce1O54941 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarce1O54941 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC15.32■□□□□ 0.04
Smarce1O54941 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Smarce1O54941 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Smarce1O54941 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smarce1O54941 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarce1O54941 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarce1O54941 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarce1O54941 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarce1O54941 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarce1O54941 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Smarce1O54941 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC15.31■□□□□ 0.04
Smarce1O54941 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.31■□□□□ 0.04
Smarce1O54941 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarce1O54941 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.31■□□□□ 0.04
Smarce1O54941 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarce1O54941 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Smarce1O54941 Gm13813-201ENSMUST00000120998 787 ntBASIC15.31■□□□□ 0.04
Smarce1O54941 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.31■□□□□ 0.04
Smarce1O54941 Gm15429-201ENSMUST00000151268 798 ntBASIC15.31■□□□□ 0.04
Smarce1O54941 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.31■□□□□ 0.04
Smarce1O54941 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarce1O54941 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.31■□□□□ 0.04
Smarce1O54941 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.31■□□□□ 0.04
Smarce1O54941 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.31■□□□□ 0.04
Smarce1O54941 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarce1O54941 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.31■□□□□ 0.04
Smarce1O54941 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.31■□□□□ 0.04
Smarce1O54941 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smarce1O54941 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarce1O54941 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarce1O54941 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarce1O54941 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarce1O54941 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarce1O54941 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarce1O54941 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarce1O54941 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarce1O54941 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Smarce1O54941 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Smarce1O54941 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
Smarce1O54941 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Smarce1O54941 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Smarce1O54941 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smarce1O54941 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms