Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.71□□□□□ -0.37
Slc1a6O35544 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc1a6O35544 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc1a6O35544 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Slc1a6O35544 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc1a6O35544 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc1a6O35544 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.71□□□□□ -0.37
Slc1a6O35544 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc1a6O35544 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Slc1a6O35544 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Slc1a6O35544 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Slc1a6O35544 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Slc1a6O35544 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Slc1a6O35544 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Slc1a6O35544 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Slc1a6O35544 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Slc1a6O35544 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Slc1a6O35544 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.7□□□□□ -0.38
Slc1a6O35544 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc1a6O35544 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc1a6O35544 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Slc1a6O35544 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc1a6O35544 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc1a6O35544 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.7□□□□□ -0.38
Slc1a6O35544 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc1a6O35544 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc1a6O35544 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.7□□□□□ -0.38
Slc1a6O35544 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Slc1a6O35544 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
Slc1a6O35544 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Slc1a6O35544 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Slc1a6O35544 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc1a6O35544 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc1a6O35544 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Slc1a6O35544 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc1a6O35544 Gm14701-201ENSMUST00000117156 348 ntBASIC12.7□□□□□ -0.38
Slc1a6O35544 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Slc1a6O35544 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.7□□□□□ -0.38
Slc1a6O35544 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.7□□□□□ -0.38
Slc1a6O35544 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.7□□□□□ -0.38
Slc1a6O35544 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc1a6O35544 Gm9797-201ENSMUST00000052902 613 ntBASIC12.7□□□□□ -0.38
Slc1a6O35544 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc1a6O35544 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc1a6O35544 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc1a6O35544 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.7□□□□□ -0.38
Slc1a6O35544 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.7□□□□□ -0.38
Slc1a6O35544 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc1a6O35544 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc1a6O35544 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc1a6O35544 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc1a6O35544 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Slc1a6O35544 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Slc1a6O35544 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc1a6O35544 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc1a6O35544 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Slc1a6O35544 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.69□□□□□ -0.38
Slc1a6O35544 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.69□□□□□ -0.38
Slc1a6O35544 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.69□□□□□ -0.38
Slc1a6O35544 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.69□□□□□ -0.38
Slc1a6O35544 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.69□□□□□ -0.38
Slc1a6O35544 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.69□□□□□ -0.38
Slc1a6O35544 Gm27306-201ENSMUST00000183970 107 ntBASIC12.69□□□□□ -0.38
Slc1a6O35544 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.69□□□□□ -0.38
Slc1a6O35544 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.69□□□□□ -0.38
Slc1a6O35544 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Gm20445-201ENSMUST00000061905 565 ntBASIC12.69□□□□□ -0.38
Slc1a6O35544 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc1a6O35544 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Slc1a6O35544 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms