Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Efnb3O35393 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Efnb3O35393 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Efnb3O35393 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Efnb3O35393 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Efnb3O35393 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.77
Efnb3O35393 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Efnb3O35393 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Efnb3O35393 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Efnb3O35393 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Efnb3O35393 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Efnb3O35393 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Efnb3O35393 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Efnb3O35393 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC10.21□□□□□ -0.77
Efnb3O35393 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC10.21□□□□□ -0.77
Efnb3O35393 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC10.21□□□□□ -0.77
Efnb3O35393 Gm43703-201ENSMUST00000200523 763 ntBASIC10.21□□□□□ -0.77
Efnb3O35393 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.21□□□□□ -0.77
Efnb3O35393 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Efnb3O35393 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Efnb3O35393 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.21□□□□□ -0.78
Efnb3O35393 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC10.21□□□□□ -0.78
Efnb3O35393 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Efnb3O35393 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Efnb3O35393 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Efnb3O35393 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Efnb3O35393 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Efnb3O35393 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Efnb3O35393 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Efnb3O35393 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Efnb3O35393 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.21□□□□□ -0.78
Efnb3O35393 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.21□□□□□ -0.78
Efnb3O35393 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Efnb3O35393 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Efnb3O35393 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Efnb3O35393 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Efnb3O35393 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Efnb3O35393 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Efnb3O35393 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.2□□□□□ -0.78
Efnb3O35393 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.2□□□□□ -0.78
Efnb3O35393 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.2□□□□□ -0.78
Efnb3O35393 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.2□□□□□ -0.78
Efnb3O35393 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Efnb3O35393 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Efnb3O35393 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Efnb3O35393 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 Gm38294-201ENSMUST00000192831 381 ntBASIC10.2□□□□□ -0.78
Efnb3O35393 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.2□□□□□ -0.78
Efnb3O35393 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Efnb3O35393 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.2□□□□□ -0.78
Efnb3O35393 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.2□□□□□ -0.78
Efnb3O35393 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.2□□□□□ -0.78
Efnb3O35393 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Efnb3O35393 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Efnb3O35393 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
Efnb3O35393 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Efnb3O35393 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Efnb3O35393 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Efnb3O35393 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Efnb3O35393 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Efnb3O35393 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Efnb3O35393 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Efnb3O35393 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Efnb3O35393 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
Efnb3O35393 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
Efnb3O35393 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.19□□□□□ -0.78
Efnb3O35393 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Efnb3O35393 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Efnb3O35393 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Efnb3O35393 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Efnb3O35393 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Efnb3O35393 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Efnb3O35393 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Efnb3O35393 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Efnb3O35393 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Efnb3O35393 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms