Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Polr1aO35134 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Polr1aO35134 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Polr1aO35134 Gm3332-201ENSMUST00000189337 928 ntBASIC19.46■□□□□ 0.71
Polr1aO35134 Gm43045-201ENSMUST00000198725 2095 ntBASIC19.46■□□□□ 0.71
Polr1aO35134 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Polr1aO35134 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Polr1aO35134 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Polr1aO35134 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Polr1aO35134 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Polr1aO35134 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Polr1aO35134 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Polr1aO35134 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Polr1aO35134 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Polr1aO35134 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC19.46■□□□□ 0.71
Polr1aO35134 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Polr1aO35134 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Polr1aO35134 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Polr1aO35134 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Polr1aO35134 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Polr1aO35134 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Polr1aO35134 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC19.45■□□□□ 0.7
Polr1aO35134 Gm8566-201ENSMUST00000120174 465 ntBASIC19.45■□□□□ 0.7
Polr1aO35134 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC19.45■□□□□ 0.7
Polr1aO35134 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Polr1aO35134 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC19.45■□□□□ 0.7
Polr1aO35134 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Polr1aO35134 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC19.45■□□□□ 0.7
Polr1aO35134 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC19.45■□□□□ 0.7
Polr1aO35134 Gm26035-201ENSMUST00000083065 308 ntBASIC19.45■□□□□ 0.7
Polr1aO35134 Gm5847-201ENSMUST00000178959 1595 ntBASIC19.45■□□□□ 0.7
Polr1aO35134 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Polr1aO35134 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Polr1aO35134 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Polr1aO35134 Gm14724-201ENSMUST00000118400 537 ntBASIC19.45■□□□□ 0.7
Polr1aO35134 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC19.45■□□□□ 0.7
Polr1aO35134 Gm9540-201ENSMUST00000188230 478 ntBASIC19.45■□□□□ 0.7
Polr1aO35134 Gm10774-201ENSMUST00000188689 204 ntBASIC19.45■□□□□ 0.7
Polr1aO35134 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC19.45■□□□□ 0.7
Polr1aO35134 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC19.45■□□□□ 0.7
Polr1aO35134 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC19.45■□□□□ 0.7
Polr1aO35134 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Polr1aO35134 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Polr1aO35134 Gm6210-201ENSMUST00000204734 1942 ntBASIC19.45■□□□□ 0.7
Polr1aO35134 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr1aO35134 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr1aO35134 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr1aO35134 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC19.44■□□□□ 0.7
Polr1aO35134 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Polr1aO35134 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr1aO35134 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr1aO35134 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr1aO35134 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr1aO35134 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr1aO35134 Gm5385-201ENSMUST00000118988 1559 ntBASIC19.44■□□□□ 0.7
Polr1aO35134 Gm42840-201ENSMUST00000200303 2251 ntBASIC19.44■□□□□ 0.7
Polr1aO35134 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr1aO35134 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr1aO35134 Gm15881-201ENSMUST00000148792 942 ntBASIC19.44■□□□□ 0.7
Polr1aO35134 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC19.44■□□□□ 0.7
Polr1aO35134 Gm43830-201ENSMUST00000198760 1067 ntBASIC19.44■□□□□ 0.7
Polr1aO35134 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Polr1aO35134 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC19.44■□□□□ 0.7
Polr1aO35134 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr1aO35134 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr1aO35134 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr1aO35134 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Polr1aO35134 Gm21998-201ENSMUST00000117552 1308 ntBASIC19.44■□□□□ 0.7
Polr1aO35134 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Polr1aO35134 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr1aO35134 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC19.44■□□□□ 0.7
Polr1aO35134 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr1aO35134 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Polr1aO35134 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Polr1aO35134 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
Polr1aO35134 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Polr1aO35134 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Polr1aO35134 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC19.43■□□□□ 0.7
Polr1aO35134 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC19.43■□□□□ 0.7
Polr1aO35134 Gm45550-201ENSMUST00000209380 946 ntBASIC19.43■□□□□ 0.7
Polr1aO35134 Gm4797-201ENSMUST00000219075 1283 ntBASIC19.43■□□□□ 0.7
Polr1aO35134 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Polr1aO35134 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Polr1aO35134 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Polr1aO35134 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Polr1aO35134 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Polr1aO35134 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Polr1aO35134 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Polr1aO35134 Gm9072-201ENSMUST00000218390 1514 ntBASIC19.43■□□□□ 0.7
Polr1aO35134 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC19.43■□□□□ 0.7
Polr1aO35134 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Polr1aO35134 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Polr1aO35134 Gm26286-201ENSMUST00000104166 134 ntBASIC19.42■□□□□ 0.7
Polr1aO35134 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC19.42■□□□□ 0.7
Polr1aO35134 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Polr1aO35134 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Polr1aO35134 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Polr1aO35134 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC19.42■□□□□ 0.7
Polr1aO35134 Gm6905-201ENSMUST00000205729 511 ntBASIC19.42■□□□□ 0.7
Polr1aO35134 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms