Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.03□□□□□ -0.48
Hps1O08983 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.03□□□□□ -0.48
Hps1O08983 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Gm27892-201ENSMUST00000185017 106 ntBASIC12.03□□□□□ -0.48
Hps1O08983 Gm21470-201ENSMUST00000187680 696 ntBASIC12.03□□□□□ -0.48
Hps1O08983 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.03□□□□□ -0.48
Hps1O08983 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.03□□□□□ -0.48
Hps1O08983 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.03□□□□□ -0.48
Hps1O08983 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Matn2-203ENSMUST00000226766 3252 ntBASIC12.03□□□□□ -0.48
Hps1O08983 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.03□□□□□ -0.48
Hps1O08983 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Hps1O08983 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.03□□□□□ -0.48
Hps1O08983 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.03□□□□□ -0.48
Hps1O08983 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Hps1O08983 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hps1O08983 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hps1O08983 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hps1O08983 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.02□□□□□ -0.48
Hps1O08983 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Hps1O08983 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hps1O08983 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hps1O08983 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hps1O08983 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Hps1O08983 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hps1O08983 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hps1O08983 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hps1O08983 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.02□□□□□ -0.48
Hps1O08983 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Hps1O08983 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.02□□□□□ -0.49
Hps1O08983 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.02□□□□□ -0.49
Hps1O08983 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hps1O08983 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.02□□□□□ -0.49
Hps1O08983 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hps1O08983 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hps1O08983 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hps1O08983 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.02□□□□□ -0.49
Hps1O08983 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Hps1O08983 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hps1O08983 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.02□□□□□ -0.49
Hps1O08983 Gm21854-201ENSMUST00000179901 471 ntBASIC12.02□□□□□ -0.49
Hps1O08983 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.02□□□□□ -0.49
Hps1O08983 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.02□□□□□ -0.49
Hps1O08983 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.02□□□□□ -0.49
Hps1O08983 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.02□□□□□ -0.49
Hps1O08983 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.02□□□□□ -0.49
Hps1O08983 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hps1O08983 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.02□□□□□ -0.49
Hps1O08983 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hps1O08983 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hps1O08983 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hps1O08983 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Hps1O08983 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hps1O08983 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hps1O08983 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hps1O08983 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hps1O08983 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hps1O08983 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hps1O08983 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hps1O08983 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Hps1O08983 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hps1O08983 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Hps1O08983 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Hps1O08983 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Hps1O08983 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hps1O08983 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Hps1O08983 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hps1O08983 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hps1O08983 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hps1O08983 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hps1O08983 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hps1O08983 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hps1O08983 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hps1O08983 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hps1O08983 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hps1O08983 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hps1O08983 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.01□□□□□ -0.49
Hps1O08983 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Hps1O08983 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Hps1O08983 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.01□□□□□ -0.49
Hps1O08983 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Hps1O08983 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hps1O08983 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hps1O08983 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Hps1O08983 Gm15460-201ENSMUST00000118147 391 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms