Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ebf3O08791 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ebf3O08791 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf3O08791 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf3O08791 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.42□□□□□ -0.26
Ebf3O08791 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf3O08791 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf3O08791 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf3O08791 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf3O08791 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ebf3O08791 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf3O08791 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf3O08791 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf3O08791 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.42□□□□□ -0.26
Ebf3O08791 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.42□□□□□ -0.26
Ebf3O08791 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf3O08791 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf3O08791 Gm37466-201ENSMUST00000195692 652 ntBASIC13.42□□□□□ -0.26
Ebf3O08791 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf3O08791 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf3O08791 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ebf3O08791 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf3O08791 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf3O08791 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.42□□□□□ -0.26
Ebf3O08791 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf3O08791 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf3O08791 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf3O08791 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf3O08791 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.42□□□□□ -0.26
Ebf3O08791 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.42□□□□□ -0.26
Ebf3O08791 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf3O08791 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ebf3O08791 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf3O08791 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ebf3O08791 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf3O08791 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf3O08791 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf3O08791 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf3O08791 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf3O08791 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf3O08791 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf3O08791 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf3O08791 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf3O08791 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.41□□□□□ -0.26
Ebf3O08791 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf3O08791 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf3O08791 Gm17376-201ENSMUST00000166016 84 ntBASIC13.41□□□□□ -0.26
Ebf3O08791 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ebf3O08791 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf3O08791 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ebf3O08791 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf3O08791 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf3O08791 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf3O08791 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf3O08791 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ebf3O08791 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.41□□□□□ -0.26
Ebf3O08791 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.41□□□□□ -0.26
Ebf3O08791 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf3O08791 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf3O08791 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf3O08791 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf3O08791 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf3O08791 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf3O08791 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf3O08791 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf3O08791 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf3O08791 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.4□□□□□ -0.26
Ebf3O08791 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.4□□□□□ -0.26
Ebf3O08791 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.4□□□□□ -0.26
Ebf3O08791 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf3O08791 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf3O08791 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Ebf3O08791 Gm16570-201ENSMUST00000161951 436 ntBASIC13.4□□□□□ -0.26
Ebf3O08791 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf3O08791 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf3O08791 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf3O08791 Gm6082-201ENSMUST00000215204 454 ntBASIC13.4□□□□□ -0.26
Ebf3O08791 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf3O08791 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf3O08791 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.4□□□□□ -0.26
Ebf3O08791 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf3O08791 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ebf3O08791 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf3O08791 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Ebf3O08791 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf3O08791 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf3O08791 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf3O08791 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf3O08791 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ebf3O08791 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.4□□□□□ -0.27
Ebf3O08791 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf3O08791 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Ebf3O08791 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf3O08791 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf3O08791 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf3O08791 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf3O08791 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf3O08791 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.39□□□□□ -0.27
Ebf3O08791 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ebf3O08791 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms