Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Tcof1O08784 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Tcof1O08784 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Tcof1O08784 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Tcof1O08784 Gm38266-201ENSMUST00000194931 421 ntBASIC15.09■□□□□ 0.01
Tcof1O08784 Gm43822-201ENSMUST00000200285 476 ntBASIC15.09■□□□□ 0.01
Tcof1O08784 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.09■□□□□ 0.01
Tcof1O08784 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC15.09■□□□□ 0.01
Tcof1O08784 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Tcof1O08784 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.09■□□□□ 0.01
Tcof1O08784 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Tcof1O08784 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tcof1O08784 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tcof1O08784 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.08■□□□□ 0.01
Tcof1O08784 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.08■□□□□ 0.01
Tcof1O08784 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tcof1O08784 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Tcof1O08784 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Tcof1O08784 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tcof1O08784 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Tcof1O08784 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0
Tcof1O08784 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tcof1O08784 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Tcof1O08784 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tcof1O08784 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tcof1O08784 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.08■□□□□ 0
Tcof1O08784 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC15.08■□□□□ 0
Tcof1O08784 Gm12291-201ENSMUST00000121627 311 ntBASIC15.08■□□□□ 0
Tcof1O08784 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC15.08■□□□□ 0
Tcof1O08784 Gm27516-201ENSMUST00000184237 98 ntBASIC15.08■□□□□ 0
Tcof1O08784 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.08■□□□□ 0
Tcof1O08784 Gm18584-201ENSMUST00000203098 964 ntBASIC15.08■□□□□ 0
Tcof1O08784 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC15.08■□□□□ 0
Tcof1O08784 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.08■□□□□ 0
Tcof1O08784 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Tcof1O08784 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tcof1O08784 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tcof1O08784 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tcof1O08784 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tcof1O08784 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tcof1O08784 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tcof1O08784 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tcof1O08784 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tcof1O08784 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Tcof1O08784 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tcof1O08784 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tcof1O08784 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tcof1O08784 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.08■□□□□ 0
Tcof1O08784 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tcof1O08784 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tcof1O08784 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tcof1O08784 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tcof1O08784 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tcof1O08784 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC15.07■□□□□ 0
Tcof1O08784 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Tcof1O08784 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tcof1O08784 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Tcof1O08784 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Tcof1O08784 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.07■□□□□ 0
Tcof1O08784 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tcof1O08784 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.07■□□□□ 0
Tcof1O08784 Gm8738-201ENSMUST00000172606 329 ntBASIC15.07■□□□□ 0
Tcof1O08784 Gm7584-201ENSMUST00000175829 940 ntBASIC15.07■□□□□ 0
Tcof1O08784 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.07■□□□□ 0
Tcof1O08784 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC15.07■□□□□ 0
Tcof1O08784 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tcof1O08784 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tcof1O08784 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tcof1O08784 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.07■□□□□ 0
Tcof1O08784 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Tcof1O08784 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.07■□□□□ 0
Tcof1O08784 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tcof1O08784 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tcof1O08784 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tcof1O08784 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Tcof1O08784 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tcof1O08784 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Tcof1O08784 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Tcof1O08784 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Tcof1O08784 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC15.06■□□□□ 0
Tcof1O08784 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms