Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Gm44126-201ENSMUST00000204831 514 ntBASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcf11G3X9Z4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcf11G3X9Z4 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcf11G3X9Z4 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcf11G3X9Z4 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcf11G3X9Z4 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcf11G3X9Z4 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcf11G3X9Z4 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcf11G3X9Z4 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Pcf11G3X9Z4 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcf11G3X9Z4 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcf11G3X9Z4 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcf11G3X9Z4 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Pcf11G3X9Z4 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcf11G3X9Z4 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcf11G3X9Z4 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcf11G3X9Z4 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcf11G3X9Z4 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pcf11G3X9Z4 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcf11G3X9Z4 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcf11G3X9Z4 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcf11G3X9Z4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pcf11G3X9Z4 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcf11G3X9Z4 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcf11G3X9Z4 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcf11G3X9Z4 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pcf11G3X9Z4 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcf11G3X9Z4 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcf11G3X9Z4 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcf11G3X9Z4 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcf11G3X9Z4 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pcf11G3X9Z4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcf11G3X9Z4 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcf11G3X9Z4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Pcf11G3X9Z4 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcf11G3X9Z4 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcf11G3X9Z4 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcf11G3X9Z4 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcf11G3X9Z4 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcf11G3X9Z4 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pcf11G3X9Z4 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcf11G3X9Z4 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcf11G3X9Z4 Gm8285-201ENSMUST00000208293 759 ntBASIC19.17■□□□□ 0.66
Pcf11G3X9Z4 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcf11G3X9Z4 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcf11G3X9Z4 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcf11G3X9Z4 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcf11G3X9Z4 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcf11G3X9Z4 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcf11G3X9Z4 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcf11G3X9Z4 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Gm13035-201ENSMUST00000117496 342 ntBASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Gm6335-201ENSMUST00000118081 1194 ntBASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Gm6506-201ENSMUST00000119775 1136 ntBASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Gm7816-201ENSMUST00000119884 1194 ntBASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Gm15542-201ENSMUST00000121585 1194 ntBASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Gm5523-201ENSMUST00000180415 997 ntBASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 CT009718.3-201ENSMUST00000221116 367 ntBASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Zkscan3-207ENSMUST00000223831 2101 ntBASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 AC169036.1-201ENSMUST00000227994 296 ntBASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcf11G3X9Z4 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms