Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Colca2F8VPY8 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.1□□□□□ -0.47
Colca2F8VPY8 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.1□□□□□ -0.47
Colca2F8VPY8 Mir6958-201ENSMUST00000184207 73 ntBASIC12.1□□□□□ -0.47
Colca2F8VPY8 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Gm5733-201ENSMUST00000190232 939 ntBASIC12.1□□□□□ -0.47
Colca2F8VPY8 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Colca2F8VPY8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.09□□□□□ -0.47
Colca2F8VPY8 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Colca2F8VPY8 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Gm23085-201ENSMUST00000157849 293 ntBASIC12.09□□□□□ -0.47
Colca2F8VPY8 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Gm18304-201ENSMUST00000189162 546 ntBASIC12.09□□□□□ -0.47
Colca2F8VPY8 Gm6905-201ENSMUST00000205729 511 ntBASIC12.09□□□□□ -0.47
Colca2F8VPY8 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.09□□□□□ -0.47
Colca2F8VPY8 CT025551.1-201ENSMUST00000223996 692 ntBASIC12.09□□□□□ -0.47
Colca2F8VPY8 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.09□□□□□ -0.47
Colca2F8VPY8 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.09□□□□□ -0.47
Colca2F8VPY8 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC12.09□□□□□ -0.47
Colca2F8VPY8 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Colca2F8VPY8 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.09□□□□□ -0.47
Colca2F8VPY8 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.09□□□□□ -0.47
Colca2F8VPY8 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Colca2F8VPY8 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms