Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pcdh1F7BJK1 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pcdh1F7BJK1 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Gm14057-201ENSMUST00000120631 482 ntBASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Gm27838-201ENSMUST00000184829 128 ntBASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Gm42550-201ENSMUST00000201553 960 ntBASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pcdh1F7BJK1 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms