Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh11xF6ZNL5 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdh11xF6ZNL5 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh11xF6ZNL5 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh11xF6ZNL5 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.26□□□□□ -0.13
Pcdh11xF6ZNL5 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdh11xF6ZNL5 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh11xF6ZNL5 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pcdh11xF6ZNL5 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh11xF6ZNL5 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdh11xF6ZNL5 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Gm14921-201ENSMUST00000118643 908 ntBASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Gm13369-201ENSMUST00000119442 987 ntBASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 AC159195.1-201ENSMUST00000225867 2086 ntBASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdh11xF6ZNL5 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Gm12957-201ENSMUST00000117835 377 ntBASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Gm2231-201ENSMUST00000125661 612 ntBASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Gm27731-201ENSMUST00000185192 107 ntBASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh11xF6ZNL5 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh11xF6ZNL5 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh11xF6ZNL5 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh11xF6ZNL5 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh11xF6ZNL5 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdh11xF6ZNL5 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdh11xF6ZNL5 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh11xF6ZNL5 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh11xF6ZNL5 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Pcdh11xF6ZNL5 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh11xF6ZNL5 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh11xF6ZNL5 Gm4271-201ENSMUST00000174444 973 ntBASIC14.23□□□□□ -0.13
Pcdh11xF6ZNL5 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh11xF6ZNL5 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms