Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Atf6F6VAN0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Atf6F6VAN0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atf6F6VAN0 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atf6F6VAN0 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Atf6F6VAN0 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.25□□□□□ -0.29
Atf6F6VAN0 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.25□□□□□ -0.29
Atf6F6VAN0 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Atf6F6VAN0 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.25□□□□□ -0.29
Atf6F6VAN0 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.25□□□□□ -0.29
Atf6F6VAN0 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Gm15806-201ENSMUST00000120696 955 ntBASIC13.25□□□□□ -0.29
Atf6F6VAN0 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.25□□□□□ -0.29
Atf6F6VAN0 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Atf6F6VAN0 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.25□□□□□ -0.29
Atf6F6VAN0 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.25□□□□□ -0.29
Atf6F6VAN0 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6F6VAN0 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.24□□□□□ -0.29
Atf6F6VAN0 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Gm8805-201ENSMUST00000117848 313 ntBASIC13.24□□□□□ -0.29
Atf6F6VAN0 Gm12203-201ENSMUST00000118235 598 ntBASIC13.24□□□□□ -0.29
Atf6F6VAN0 Gm12209-201ENSMUST00000120089 596 ntBASIC13.24□□□□□ -0.29
Atf6F6VAN0 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.24□□□□□ -0.29
Atf6F6VAN0 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Gm9002-201ENSMUST00000178437 499 ntBASIC13.24□□□□□ -0.29
Atf6F6VAN0 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Gm27892-201ENSMUST00000185017 106 ntBASIC13.24□□□□□ -0.29
Atf6F6VAN0 Gm37922-201ENSMUST00000195596 455 ntBASIC13.24□□□□□ -0.29
Atf6F6VAN0 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6F6VAN0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Gm17794-201ENSMUST00000220252 955 ntBASIC13.24□□□□□ -0.29
Atf6F6VAN0 Gm25007-201ENSMUST00000083808 133 ntBASIC13.24□□□□□ -0.29
Atf6F6VAN0 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.24□□□□□ -0.29
Atf6F6VAN0 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6F6VAN0 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6F6VAN0 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6F6VAN0 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms