Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.09□□□□□ -0.31
Ccdc149F6V035 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.09□□□□□ -0.31
Ccdc149F6V035 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Gm17376-201ENSMUST00000166016 84 ntBASIC13.09□□□□□ -0.31
Ccdc149F6V035 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Gm31256-201ENSMUST00000194705 506 ntBASIC13.09□□□□□ -0.31
Ccdc149F6V035 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.09□□□□□ -0.31
Ccdc149F6V035 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.09□□□□□ -0.31
Ccdc149F6V035 Matn2-206ENSMUST00000228570 2798 ntBASIC13.09□□□□□ -0.31
Ccdc149F6V035 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ccdc149F6V035 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ccdc149F6V035 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ccdc149F6V035 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ccdc149F6V035 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ccdc149F6V035 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.08□□□□□ -0.31
Ccdc149F6V035 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
Ccdc149F6V035 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Ccdc149F6V035 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Gm8176-201ENSMUST00000191297 1099 ntBASIC13.08□□□□□ -0.32
Ccdc149F6V035 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.08□□□□□ -0.32
Ccdc149F6V035 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc149F6V035 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc149F6V035 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc149F6V035 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc149F6V035 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc149F6V035 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc149F6V035 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc149F6V035 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc149F6V035 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.07□□□□□ -0.32
Ccdc149F6V035 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.07□□□□□ -0.32
Ccdc149F6V035 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc149F6V035 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc149F6V035 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.07□□□□□ -0.32
Ccdc149F6V035 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc149F6V035 Gm2546-201ENSMUST00000182630 991 ntBASIC13.07□□□□□ -0.32
Ccdc149F6V035 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccdc149F6V035 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.07□□□□□ -0.32
Ccdc149F6V035 Gm38092-201ENSMUST00000195600 653 ntBASIC13.07□□□□□ -0.32
Ccdc149F6V035 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc149F6V035 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccdc149F6V035 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc149F6V035 Gm22058-201ENSMUST00000083393 310 ntBASIC13.07□□□□□ -0.32
Ccdc149F6V035 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.07□□□□□ -0.32
Ccdc149F6V035 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc149F6V035 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc149F6V035 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc149F6V035 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc149F6V035 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms