Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 AC154305.4-201ENSMUST00000224520 614 ntBASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdhb9E9Q5G2 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Gm13297-201ENSMUST00000120205 934 ntBASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 AC167013.1-201ENSMUST00000228592 202 ntBASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Gm7789-202ENSMUST00000211273 1400 ntBASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Pcdhb9E9Q5G2 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Gm15370-201ENSMUST00000117158 253 ntBASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Gm22058-201ENSMUST00000083393 310 ntBASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Pcdhb9E9Q5G2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Pcdhb9E9Q5G2 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms