Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm32025-201ENSMUST00000217960 307 ntBASIC10.92□□□□□ -0.66
Cpsf4lE9Q2N0 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Cpsf4lE9Q2N0 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4lE9Q2N0 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Cpsf4lE9Q2N0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.92□□□□□ -0.66
Cpsf4lE9Q2N0 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.92□□□□□ -0.66
Cpsf4lE9Q2N0 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4lE9Q2N0 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4lE9Q2N0 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4lE9Q2N0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4lE9Q2N0 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4lE9Q2N0 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.92□□□□□ -0.66
Cpsf4lE9Q2N0 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4lE9Q2N0 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC10.92□□□□□ -0.66
Cpsf4lE9Q2N0 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4lE9Q2N0 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Cpsf4lE9Q2N0 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4lE9Q2N0 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.92□□□□□ -0.66
Cpsf4lE9Q2N0 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.92□□□□□ -0.66
Cpsf4lE9Q2N0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4lE9Q2N0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4lE9Q2N0 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Cpsf4lE9Q2N0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Gm8099-201ENSMUST00000200510 742 ntBASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Cpsf4lE9Q2N0 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Mir1982-201ENSMUST00000157368 74 ntBASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Gm23363-201ENSMUST00000175024 79 ntBASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Cpsf4lE9Q2N0 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms