Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm14999-201ENSMUST00000121039 624 ntBASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Scn3aA2ASI5 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Gm16570-201ENSMUST00000161951 436 ntBASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Gm5070-201ENSMUST00000177599 862 ntBASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Gm44958-201ENSMUST00000203734 736 ntBASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Gm10312-201ENSMUST00000078515 489 ntBASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Mir5120-201ENSMUST00000175020 78 ntBASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Mir3102-201ENSMUST00000175555 104 ntBASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Gm18212-201ENSMUST00000211678 889 ntBASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Scn3aA2ASI5 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Gm24231-201ENSMUST00000104315 133 ntBASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Gm12015-201ENSMUST00000117065 843 ntBASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Gm14017-201ENSMUST00000121934 386 ntBASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Scn3aA2ASI5 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms