Protein–RNA interactions for Protein: A2A935

Prdm16, PR domain zinc finger protein 16, mousemouse

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm16A2A935 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm16A2A935 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Prdm16A2A935 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm16A2A935 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm16A2A935 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm16A2A935 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm16A2A935 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC18.42■□□□□ 0.54
Prdm16A2A935 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm16A2A935 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm16A2A935 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm16A2A935 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm16A2A935 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm16A2A935 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm16A2A935 Gm13394-201ENSMUST00000121658 1000 ntBASIC18.42■□□□□ 0.54
Prdm16A2A935 Gm23119-201ENSMUST00000158610 140 ntBASIC18.42■□□□□ 0.54
Prdm16A2A935 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC18.42■□□□□ 0.54
Prdm16A2A935 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC18.42■□□□□ 0.54
Prdm16A2A935 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm16A2A935 Gm45242-201ENSMUST00000210666 2129 ntBASIC18.42■□□□□ 0.54
Prdm16A2A935 D9Wsu149-201ENSMUST00000214169 594 ntBASIC18.42■□□□□ 0.54
Prdm16A2A935 AC141438.2-201ENSMUST00000215068 271 ntBASIC18.42■□□□□ 0.54
Prdm16A2A935 Gm10371-202ENSMUST00000228010 1081 ntBASIC18.42■□□□□ 0.54
Prdm16A2A935 AC135114.1-201ENSMUST00000228682 270 ntBASIC18.42■□□□□ 0.54
Prdm16A2A935 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm16A2A935 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm16A2A935 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm16A2A935 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm16A2A935 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm16A2A935 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Prdm16A2A935 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm16A2A935 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm16A2A935 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm16A2A935 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm16A2A935 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm16A2A935 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm16A2A935 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Prdm16A2A935 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm16A2A935 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm16A2A935 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm16A2A935 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm16A2A935 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm16A2A935 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Prdm16A2A935 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm16A2A935 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm16A2A935 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm16A2A935 Gm22133-201ENSMUST00000102082 109 ntBASIC18.41■□□□□ 0.54
Prdm16A2A935 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm16A2A935 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC18.41■□□□□ 0.54
Prdm16A2A935 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC18.41■□□□□ 0.54
Prdm16A2A935 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Prdm16A2A935 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC18.41■□□□□ 0.54
Prdm16A2A935 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC18.41■□□□□ 0.54
Prdm16A2A935 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm16A2A935 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Prdm16A2A935 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Prdm16A2A935 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm16A2A935 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm16A2A935 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm16A2A935 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Prdm16A2A935 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Prdm16A2A935 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prdm16A2A935 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm16A2A935 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm16A2A935 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC18.4■□□□□ 0.54
Prdm16A2A935 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm16A2A935 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Prdm16A2A935 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm16A2A935 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm16A2A935 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm16A2A935 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC18.4■□□□□ 0.54
Prdm16A2A935 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm16A2A935 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm16A2A935 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC18.4■□□□□ 0.54
Prdm16A2A935 Gm15782-201ENSMUST00000121073 445 ntBASIC18.4■□□□□ 0.54
Prdm16A2A935 H2-Q3-201ENSMUST00000172583 608 ntBASIC18.4■□□□□ 0.54
Prdm16A2A935 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm16A2A935 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm16A2A935 Gm5732-201ENSMUST00000182596 1007 ntBASIC18.4■□□□□ 0.54
Prdm16A2A935 Gm43962-201ENSMUST00000203898 190 ntBASIC18.4■□□□□ 0.54
Prdm16A2A935 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm16A2A935 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm16A2A935 AC125486.1-201ENSMUST00000218701 320 ntBASIC18.4■□□□□ 0.54
Prdm16A2A935 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm16A2A935 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm16A2A935 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
Prdm16A2A935 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm16A2A935 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm16A2A935 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Prdm16A2A935 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC18.39■□□□□ 0.54
Prdm16A2A935 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Prdm16A2A935 Gm13142-201ENSMUST00000117213 1453 ntBASIC18.39■□□□□ 0.54
Prdm16A2A935 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Prdm16A2A935 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Prdm16A2A935 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prdm16A2A935 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC18.39■□□□□ 0.53
Prdm16A2A935 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Prdm16A2A935 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prdm16A2A935 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Prdm16A2A935 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Prdm16A2A935 Gm14058-201ENSMUST00000116082 735 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms