Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trbv29A0A0G2LB96 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Mir8102-201ENSMUST00000184148 139 ntBASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trbv29A0A0G2LB96 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trbv29A0A0G2LB96 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trbv29A0A0G2LB96 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trbv29A0A0G2LB96 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.71□□□□□ -0.7
Trbv29A0A0G2LB96 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Gm22189-201ENSMUST00000103822 86 ntBASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Gm14719-201ENSMUST00000121891 340 ntBASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trbv29A0A0G2LB96 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trbv29A0A0G2LB96 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trbv29A0A0G2LB96 Mypopos-202ENSMUST00000205975 2321 ntBASIC10.69□□□□□ -0.7
Trbv29A0A0G2LB96 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trbv29A0A0G2LB96 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.69□□□□□ -0.7
Trbv29A0A0G2LB96 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trbv29A0A0G2LB96 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.69□□□□□ -0.7
Trbv29A0A0G2LB96 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trbv29A0A0G2LB96 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms