Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.58□□□□□ -0.72
Trav18A0A075B656 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.58□□□□□ -0.72
Trav18A0A075B656 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav18A0A075B656 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav18A0A075B656 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.57□□□□□ -0.72
Trav18A0A075B656 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Gm11978-201ENSMUST00000122315 466 ntBASIC10.57□□□□□ -0.72
Trav18A0A075B656 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav18A0A075B656 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.57□□□□□ -0.72
Trav18A0A075B656 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.57□□□□□ -0.72
Trav18A0A075B656 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav18A0A075B656 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.56□□□□□ -0.72
Trav18A0A075B656 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.56□□□□□ -0.72
Trav18A0A075B656 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Gm16202-201ENSMUST00000117532 544 ntBASIC10.56□□□□□ -0.72
Trav18A0A075B656 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Gm28631-201ENSMUST00000190740 334 ntBASIC10.56□□□□□ -0.72
Trav18A0A075B656 Gm44397-201ENSMUST00000195950 113 ntBASIC10.56□□□□□ -0.72
Trav18A0A075B656 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.56□□□□□ -0.72
Trav18A0A075B656 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Gm6458-201ENSMUST00000211573 635 ntBASIC10.56□□□□□ -0.72
Trav18A0A075B656 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.56□□□□□ -0.72
Trav18A0A075B656 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Trav18A0A075B656 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms