Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5-4A0A075B652 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Gm13689-201ENSMUST00000119360 685 ntBASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 AC125206.2-201ENSMUST00000217454 574 ntBASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 AC156560.2-201ENSMUST00000221232 264 ntBASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5-4A0A075B652 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Gm15371-201ENSMUST00000117057 784 ntBASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Gm12341-201ENSMUST00000119724 503 ntBASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Gm28631-201ENSMUST00000190740 334 ntBASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Gm18307-201ENSMUST00000206864 949 ntBASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Map1b-203ENSMUST00000223725 2669 ntBASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav5-4A0A075B652 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms