Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC9.93□□□□□ -0.82
PdfS4R2K0 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
PdfS4R2K0 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC9.93□□□□□ -0.82
PdfS4R2K0 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
PdfS4R2K0 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC9.93□□□□□ -0.82
PdfS4R2K0 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.93□□□□□ -0.82
PdfS4R2K0 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC9.93□□□□□ -0.82
PdfS4R2K0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC9.93□□□□□ -0.82
PdfS4R2K0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
PdfS4R2K0 Gm3436-201ENSMUST00000179930 840 ntBASIC9.93□□□□□ -0.82
PdfS4R2K0 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Mir6977-201ENSMUST00000184960 64 ntBASIC9.93□□□□□ -0.82
PdfS4R2K0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC9.93□□□□□ -0.82
PdfS4R2K0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
PdfS4R2K0 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Gm45453-201ENSMUST00000211758 853 ntBASIC9.93□□□□□ -0.82
PdfS4R2K0 AC166997.1-201ENSMUST00000225122 572 ntBASIC9.93□□□□□ -0.82
PdfS4R2K0 AC156016.3-201ENSMUST00000228623 344 ntBASIC9.93□□□□□ -0.82
PdfS4R2K0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
PdfS4R2K0 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
PdfS4R2K0 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Rnf17-202ENSMUST00000223627 2077 ntBASIC9.93□□□□□ -0.82
PdfS4R2K0 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
PdfS4R2K0 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
PdfS4R2K0 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
PdfS4R2K0 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PdfS4R2K0 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC9.92□□□□□ -0.82
PdfS4R2K0 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PdfS4R2K0 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC9.92□□□□□ -0.82
PdfS4R2K0 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
PdfS4R2K0 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PdfS4R2K0 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PdfS4R2K0 Gm45643-201ENSMUST00000211364 1484 ntBASIC9.92□□□□□ -0.82
PdfS4R2K0 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PdfS4R2K0 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
PdfS4R2K0 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PdfS4R2K0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PdfS4R2K0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PdfS4R2K0 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC9.92□□□□□ -0.82
PdfS4R2K0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PdfS4R2K0 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC9.92□□□□□ -0.82
PdfS4R2K0 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
PdfS4R2K0 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PdfS4R2K0 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
PdfS4R2K0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PdfS4R2K0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
PdfS4R2K0 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PdfS4R2K0 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PdfS4R2K0 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PdfS4R2K0 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PdfS4R2K0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PdfS4R2K0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PdfS4R2K0 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PdfS4R2K0 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC9.92□□□□□ -0.82
PdfS4R2K0 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC9.92□□□□□ -0.82
PdfS4R2K0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PdfS4R2K0 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC9.92□□□□□ -0.82
PdfS4R2K0 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PdfS4R2K0 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
PdfS4R2K0 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PdfS4R2K0 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
PdfS4R2K0 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PdfS4R2K0 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC9.92□□□□□ -0.82
PdfS4R2K0 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC9.92□□□□□ -0.82
PdfS4R2K0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC9.92□□□□□ -0.82
PdfS4R2K0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PdfS4R2K0 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PdfS4R2K0 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms