Protein–RNA interactions for Protein: Q9Z2E2

Mbd1, Methyl-CpG-binding domain protein 1, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd1Q9Z2E2 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mbd1Q9Z2E2 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.18□□□□□ -0.3
Mbd1Q9Z2E2 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.18□□□□□ -0.3
Mbd1Q9Z2E2 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mbd1Q9Z2E2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mbd1Q9Z2E2 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mbd1Q9Z2E2 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.18□□□□□ -0.3
Mbd1Q9Z2E2 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mbd1Q9Z2E2 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Mbd1Q9Z2E2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mbd1Q9Z2E2 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.18□□□□□ -0.3
Mbd1Q9Z2E2 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Mbd1Q9Z2E2 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Mbd1Q9Z2E2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Mbd1Q9Z2E2 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Gm28911-201ENSMUST00000188837 117 ntBASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mbd1Q9Z2E2 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Gm18018-201ENSMUST00000198273 408 ntBASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Gm6007-201ENSMUST00000208170 823 ntBASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Gm8598-201ENSMUST00000221184 836 ntBASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Mbd1Q9Z2E2 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mbd1Q9Z2E2 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mbd1Q9Z2E2 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Mbd1Q9Z2E2 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Mbd1Q9Z2E2 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mbd1Q9Z2E2 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mbd1Q9Z2E2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mbd1Q9Z2E2 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mbd1Q9Z2E2 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mbd1Q9Z2E2 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mbd1Q9Z2E2 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mbd1Q9Z2E2 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mbd1Q9Z2E2 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mbd1Q9Z2E2 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mbd1Q9Z2E2 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mbd1Q9Z2E2 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Mbd1Q9Z2E2 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Mbd1Q9Z2E2 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mbd1Q9Z2E2 Gm12490-201ENSMUST00000120255 560 ntBASIC13.15□□□□□ -0.3
Mbd1Q9Z2E2 Gm13813-201ENSMUST00000120998 787 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms