Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 Gm45925-201ENSMUST00000218882 744 ntBASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smarcb1Q9Z0H3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Smarcb1Q9Z0H3 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Smarcb1Q9Z0H3 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.27
Smarcb1Q9Z0H3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Smarcb1Q9Z0H3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Gm12058-201ENSMUST00000118614 437 ntBASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Gm27243-201ENSMUST00000183964 521 ntBASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Gm22058-201ENSMUST00000083393 310 ntBASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.39□□□□□ -0.27
Smarcb1Q9Z0H3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smarcb1Q9Z0H3 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Gm16296-201ENSMUST00000159905 325 ntBASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Gm2546-201ENSMUST00000182630 991 ntBASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Gm4857-201ENSMUST00000192718 785 ntBASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Gm30285-201ENSMUST00000214614 422 ntBASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smarcb1Q9Z0H3 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms