Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Gm16202-201ENSMUST00000117532 544 ntBASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Gm13392-201ENSMUST00000117708 150 ntBASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Gm13369-201ENSMUST00000119442 987 ntBASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Gm27682-201ENSMUST00000183930 110 ntBASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clcf1Q9QZM3 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Gm13123-201ENSMUST00000122173 492 ntBASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Gm27514-201ENSMUST00000183692 110 ntBASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clcf1Q9QZM3 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Clcf1Q9QZM3 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms