Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Gm6983-201ENSMUST00000214912 628 ntBASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.67□□□□□ -0.54
Sec61a2Q9JLR1 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Gm19931-201ENSMUST00000198920 368 ntBASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Gm8463-201ENSMUST00000208573 613 ntBASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sec61a2Q9JLR1 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Sec61a2Q9JLR1 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a2Q9JLR1 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.65□□□□□ -0.54
Sec61a2Q9JLR1 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Sec61a2Q9JLR1 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a2Q9JLR1 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a2Q9JLR1 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Sec61a2Q9JLR1 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.65□□□□□ -0.54
Sec61a2Q9JLR1 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a2Q9JLR1 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a2Q9JLR1 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.65□□□□□ -0.54
Sec61a2Q9JLR1 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a2Q9JLR1 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a2Q9JLR1 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.65□□□□□ -0.54
Sec61a2Q9JLR1 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a2Q9JLR1 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Sec61a2Q9JLR1 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a2Q9JLR1 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a2Q9JLR1 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a2Q9JLR1 Gm11478-201ENSMUST00000117851 599 ntBASIC11.65□□□□□ -0.54
Sec61a2Q9JLR1 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a2Q9JLR1 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a2Q9JLR1 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Sec61a2Q9JLR1 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms