Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim54Q9ERP3 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.99□□□□□ -0.17
Trim54Q9ERP3 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Gm25668-201ENSMUST00000157700 129 ntBASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Gm18827-201ENSMUST00000188341 790 ntBASIC13.99□□□□□ -0.17
Trim54Q9ERP3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.99□□□□□ -0.17
Trim54Q9ERP3 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
Trim54Q9ERP3 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.98□□□□□ -0.17
Trim54Q9ERP3 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Gm11222-201ENSMUST00000119005 738 ntBASIC13.98□□□□□ -0.17
Trim54Q9ERP3 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Gm37466-201ENSMUST00000195692 652 ntBASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim54Q9ERP3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim54Q9ERP3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim54Q9ERP3 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim54Q9ERP3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim54Q9ERP3 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim54Q9ERP3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim54Q9ERP3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim54Q9ERP3 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim54Q9ERP3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim54Q9ERP3 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim54Q9ERP3 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim54Q9ERP3 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.97□□□□□ -0.17
Trim54Q9ERP3 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim54Q9ERP3 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim54Q9ERP3 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim54Q9ERP3 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.97□□□□□ -0.17
Trim54Q9ERP3 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim54Q9ERP3 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC13.97□□□□□ -0.17
Trim54Q9ERP3 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim54Q9ERP3 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.97□□□□□ -0.17
Trim54Q9ERP3 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim54Q9ERP3 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim54Q9ERP3 Gm30285-201ENSMUST00000214614 422 ntBASIC13.97□□□□□ -0.17
Trim54Q9ERP3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.97□□□□□ -0.17
Trim54Q9ERP3 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim54Q9ERP3 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim54Q9ERP3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim54Q9ERP3 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms