Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.21□□□□□ -0.29
Nkx2-4Q9EQM3 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC13.21□□□□□ -0.29
Nkx2-4Q9EQM3 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.21□□□□□ -0.29
Nkx2-4Q9EQM3 Gm28071-201ENSMUST00000190355 478 ntBASIC13.21□□□□□ -0.29
Nkx2-4Q9EQM3 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.21□□□□□ -0.29
Nkx2-4Q9EQM3 Gm8365-201ENSMUST00000197334 648 ntBASIC13.21□□□□□ -0.29
Nkx2-4Q9EQM3 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
Nkx2-4Q9EQM3 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-4Q9EQM3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Nkx2-4Q9EQM3 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Nkx2-4Q9EQM3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-4Q9EQM3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Nkx2-4Q9EQM3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx2-4Q9EQM3 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx2-4Q9EQM3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
Nkx2-4Q9EQM3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx2-4Q9EQM3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx2-4Q9EQM3 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.21□□□□□ -0.3
Nkx2-4Q9EQM3 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx2-4Q9EQM3 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx2-4Q9EQM3 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.21□□□□□ -0.3
Nkx2-4Q9EQM3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nkx2-4Q9EQM3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Gm14058-201ENSMUST00000116082 735 ntBASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Gm11675-201ENSMUST00000121873 832 ntBASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Gm8018-201ENSMUST00000173536 789 ntBASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nkx2-4Q9EQM3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Gm28882-201ENSMUST00000185504 314 ntBASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 AY036118-201ENSMUST00000200021 923 ntBASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Gm19187-201ENSMUST00000206781 892 ntBASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.19□□□□□ -0.3
Nkx2-4Q9EQM3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nkx2-4Q9EQM3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-4Q9EQM3 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-4Q9EQM3 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-4Q9EQM3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-4Q9EQM3 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nkx2-4Q9EQM3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms